Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim43aQ3TL54 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim43aQ3TL54 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trim43aQ3TL54 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC14.38□□□□□ -0.11
Trim43aQ3TL54 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim43aQ3TL54 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim43aQ3TL54 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trim43aQ3TL54 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim43aQ3TL54 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim43aQ3TL54 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim43aQ3TL54 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim43aQ3TL54 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Trim43aQ3TL54 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trim43aQ3TL54 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim43aQ3TL54 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim43aQ3TL54 Gm24158-201ENSMUST00000175263 71 ntBASIC14.38□□□□□ -0.11
Trim43aQ3TL54 Gm10253-201ENSMUST00000194270 940 ntBASIC14.38□□□□□ -0.11
Trim43aQ3TL54 Gm18934-201ENSMUST00000216671 1044 ntBASIC14.38□□□□□ -0.11
Trim43aQ3TL54 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Trim43aQ3TL54 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim43aQ3TL54 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Trim43aQ3TL54 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim43aQ3TL54 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trim43aQ3TL54 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim43aQ3TL54 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Trim43aQ3TL54 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC14.38□□□□□ -0.11
Trim43aQ3TL54 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim43aQ3TL54 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC14.38□□□□□ -0.11
Trim43aQ3TL54 Pcgf5-211ENSMUST00000225920 6443 ntBASIC14.38□□□□□ -0.11
Trim43aQ3TL54 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim43aQ3TL54 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Trim43aQ3TL54 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Trim43aQ3TL54 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim43aQ3TL54 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim43aQ3TL54 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC14.38□□□□□ -0.11
Trim43aQ3TL54 Gm6018-201ENSMUST00000216090 1306 ntBASIC14.38□□□□□ -0.11
Trim43aQ3TL54 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trim43aQ3TL54 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim43aQ3TL54 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim43aQ3TL54 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim43aQ3TL54 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim43aQ3TL54 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Trim43aQ3TL54 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim43aQ3TL54 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trim43aQ3TL54 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Trim43aQ3TL54 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim43aQ3TL54 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim43aQ3TL54 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim43aQ3TL54 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC14.37□□□□□ -0.11
Trim43aQ3TL54 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trim43aQ3TL54 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim43aQ3TL54 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC14.37□□□□□ -0.11
Trim43aQ3TL54 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trim43aQ3TL54 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Trim43aQ3TL54 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC14.37□□□□□ -0.11
Trim43aQ3TL54 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trim43aQ3TL54 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trim43aQ3TL54 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trim43aQ3TL54 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Trim43aQ3TL54 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim43aQ3TL54 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trim43aQ3TL54 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim43aQ3TL54 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim43aQ3TL54 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Trim43aQ3TL54 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim43aQ3TL54 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim43aQ3TL54 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim43aQ3TL54 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC14.36□□□□□ -0.11
Trim43aQ3TL54 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Trim43aQ3TL54 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Trim43aQ3TL54 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim43aQ3TL54 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim43aQ3TL54 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Trim43aQ3TL54 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim43aQ3TL54 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim43aQ3TL54 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim43aQ3TL54 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Trim43aQ3TL54 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC14.36□□□□□ -0.11
Trim43aQ3TL54 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim43aQ3TL54 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC14.36□□□□□ -0.11
Trim43aQ3TL54 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Trim43aQ3TL54 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim43aQ3TL54 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim43aQ3TL54 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim43aQ3TL54 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim43aQ3TL54 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim43aQ3TL54 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim43aQ3TL54 Tmed9-203ENSMUST00000224741 1450 ntBASIC14.36□□□□□ -0.11
Trim43aQ3TL54 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim43aQ3TL54 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC14.36□□□□□ -0.11
Trim43aQ3TL54 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim43aQ3TL54 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim43aQ3TL54 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim43aQ3TL54 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim43aQ3TL54 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim43aQ3TL54 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Trim43aQ3TL54 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Trim43aQ3TL54 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trim43aQ3TL54 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC14.35□□□□□ -0.11
Trim43aQ3TL54 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms