Protein–RNA interactions for Protein: P97503

Nkx3-2, Homeobox protein Nkx-3.2, mousemouse

Predictions only

Length 333 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-2P97503 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Nkx3-2P97503 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Nkx3-2P97503 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Nkx3-2P97503 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Nkx3-2P97503 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Nkx3-2P97503 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Nkx3-2P97503 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Nkx3-2P97503 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC12.82□□□□□ -0.36
Nkx3-2P97503 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nkx3-2P97503 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nkx3-2P97503 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nkx3-2P97503 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Nkx3-2P97503 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nkx3-2P97503 Gm13859-201ENSMUST00000119936 1423 ntBASIC12.81□□□□□ -0.36
Nkx3-2P97503 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Nkx3-2P97503 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nkx3-2P97503 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Nkx3-2P97503 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC12.81□□□□□ -0.36
Nkx3-2P97503 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC12.81□□□□□ -0.36
Nkx3-2P97503 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC12.81□□□□□ -0.36
Nkx3-2P97503 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nkx3-2P97503 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC12.81□□□□□ -0.36
Nkx3-2P97503 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Nkx3-2P97503 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nkx3-2P97503 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC12.81□□□□□ -0.36
Nkx3-2P97503 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC12.81□□□□□ -0.36
Nkx3-2P97503 Gm5035-201ENSMUST00000215581 927 ntBASIC12.81□□□□□ -0.36
Nkx3-2P97503 Gm7446-201ENSMUST00000221035 1240 ntBASIC12.81□□□□□ -0.36
Nkx3-2P97503 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC12.81□□□□□ -0.36
Nkx3-2P97503 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nkx3-2P97503 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nkx3-2P97503 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC12.81□□□□□ -0.36
Nkx3-2P97503 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nkx3-2P97503 Mir497b-201ENSMUST00000093601 125 ntBASIC12.81□□□□□ -0.36
Nkx3-2P97503 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nkx3-2P97503 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nkx3-2P97503 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nkx3-2P97503 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nkx3-2P97503 Gm11405-201ENSMUST00000118689 1556 ntBASIC12.81□□□□□ -0.36
Nkx3-2P97503 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nkx3-2P97503 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Nkx3-2P97503 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Nkx3-2P97503 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nkx3-2P97503 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nkx3-2P97503 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nkx3-2P97503 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nkx3-2P97503 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nkx3-2P97503 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Nkx3-2P97503 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC12.81□□□□□ -0.36
Nkx3-2P97503 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nkx3-2P97503 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nkx3-2P97503 Gm9347-201ENSMUST00000211473 1607 ntBASIC12.8□□□□□ -0.36
Nkx3-2P97503 Gm42748-201ENSMUST00000199354 2341 ntBASIC12.8□□□□□ -0.36
Nkx3-2P97503 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nkx3-2P97503 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nkx3-2P97503 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Nkx3-2P97503 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Nkx3-2P97503 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nkx3-2P97503 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nkx3-2P97503 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Nkx3-2P97503 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nkx3-2P97503 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Nkx3-2P97503 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nkx3-2P97503 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nkx3-2P97503 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Nkx3-2P97503 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Nkx3-2P97503 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nkx3-2P97503 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nkx3-2P97503 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nkx3-2P97503 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nkx3-2P97503 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nkx3-2P97503 Gm17150-201ENSMUST00000165577 381 ntBASIC12.8□□□□□ -0.36
Nkx3-2P97503 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC12.8□□□□□ -0.36
Nkx3-2P97503 CT030704.2-201ENSMUST00000228887 494 ntBASIC12.8□□□□□ -0.36
Nkx3-2P97503 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Nkx3-2P97503 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Nkx3-2P97503 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Nkx3-2P97503 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Nkx3-2P97503 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nkx3-2P97503 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Nkx3-2P97503 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nkx3-2P97503 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nkx3-2P97503 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nkx3-2P97503 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC12.8□□□□□ -0.36
Nkx3-2P97503 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nkx3-2P97503 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Nkx3-2P97503 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nkx3-2P97503 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nkx3-2P97503 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Nkx3-2P97503 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Nkx3-2P97503 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Nkx3-2P97503 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nkx3-2P97503 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nkx3-2P97503 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Nkx3-2P97503 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nkx3-2P97503 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nkx3-2P97503 Gm37015-201ENSMUST00000192763 1521 ntBASIC12.79□□□□□ -0.36
Nkx3-2P97503 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC12.79□□□□□ -0.36
Nkx3-2P97503 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Nkx3-2P97503 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms