Protein–RNA interactions for Protein: P63058

Thra, Thyroid hormone receptor alpha, mousemouse

Predictions only

Length 492 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ThraP63058 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC13.73□□□□□ -0.21
ThraP63058 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
ThraP63058 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
ThraP63058 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC13.73□□□□□ -0.21
ThraP63058 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC13.73□□□□□ -0.21
ThraP63058 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC13.73□□□□□ -0.21
ThraP63058 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
ThraP63058 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
ThraP63058 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC13.73□□□□□ -0.21
ThraP63058 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
ThraP63058 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
ThraP63058 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
ThraP63058 Ighv1-25-201ENSMUST00000195638 345 ntBASIC13.73□□□□□ -0.21
ThraP63058 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
ThraP63058 Gm43433-201ENSMUST00000196573 481 ntBASIC13.73□□□□□ -0.21
ThraP63058 Gm45059-201ENSMUST00000205558 1077 ntBASIC13.73□□□□□ -0.21
ThraP63058 AC154846.1-201ENSMUST00000226278 862 ntBASIC13.73□□□□□ -0.21
ThraP63058 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
ThraP63058 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
ThraP63058 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
ThraP63058 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
ThraP63058 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
ThraP63058 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
ThraP63058 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
ThraP63058 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
ThraP63058 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC13.73□□□□□ -0.21
ThraP63058 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
ThraP63058 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC13.73□□□□□ -0.21
ThraP63058 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
ThraP63058 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
ThraP63058 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
ThraP63058 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
ThraP63058 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
ThraP63058 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
ThraP63058 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
ThraP63058 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
ThraP63058 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
ThraP63058 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
ThraP63058 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC13.72□□□□□ -0.21
ThraP63058 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
ThraP63058 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
ThraP63058 Kcnk16-202ENSMUST00000225596 2127 ntBASIC13.72□□□□□ -0.21
ThraP63058 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
ThraP63058 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
ThraP63058 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
ThraP63058 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
ThraP63058 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC13.72□□□□□ -0.21
ThraP63058 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
ThraP63058 AC131690.1-201ENSMUST00000218406 374 ntBASIC13.72□□□□□ -0.21
ThraP63058 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
ThraP63058 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
ThraP63058 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
ThraP63058 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
ThraP63058 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
ThraP63058 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
ThraP63058 AC126549.2-201ENSMUST00000223997 1976 ntBASIC13.72□□□□□ -0.21
ThraP63058 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
ThraP63058 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
ThraP63058 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC13.72□□□□□ -0.21
ThraP63058 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
ThraP63058 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
ThraP63058 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
ThraP63058 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC13.72□□□□□ -0.21
ThraP63058 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC13.72□□□□□ -0.21
ThraP63058 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
ThraP63058 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
ThraP63058 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
ThraP63058 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
ThraP63058 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC13.72□□□□□ -0.21
ThraP63058 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
ThraP63058 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
ThraP63058 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
ThraP63058 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
ThraP63058 Gm12020-201ENSMUST00000119030 2042 ntBASIC13.71□□□□□ -0.21
ThraP63058 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
ThraP63058 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
ThraP63058 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
ThraP63058 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC13.71□□□□□ -0.21
ThraP63058 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
ThraP63058 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
ThraP63058 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
ThraP63058 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
ThraP63058 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC13.71□□□□□ -0.21
ThraP63058 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
ThraP63058 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC13.71□□□□□ -0.21
ThraP63058 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
ThraP63058 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC13.71□□□□□ -0.21
ThraP63058 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
ThraP63058 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
ThraP63058 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC13.71□□□□□ -0.21
ThraP63058 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
ThraP63058 Gm19220-201ENSMUST00000222682 803 ntBASIC13.71□□□□□ -0.21
ThraP63058 AC154687.2-201ENSMUST00000223853 640 ntBASIC13.71□□□□□ -0.21
ThraP63058 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
ThraP63058 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
ThraP63058 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
ThraP63058 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC13.71□□□□□ -0.21
ThraP63058 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC13.71□□□□□ -0.21
ThraP63058 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
ThraP63058 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 70.1 ms