Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Sox3P53784 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Sox3P53784 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Sox3P53784 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sox3P53784 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sox3P53784 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sox3P53784 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sox3P53784 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sox3P53784 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Sox3P53784 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sox3P53784 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC12.99□□□□□ -0.33
Sox3P53784 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sox3P53784 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC12.99□□□□□ -0.33
Sox3P53784 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sox3P53784 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Sox3P53784 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
Sox3P53784 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sox3P53784 Gm15393-201ENSMUST00000120499 219 ntBASIC12.99□□□□□ -0.33
Sox3P53784 Tnni2-206ENSMUST00000149529 768 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
Sox3P53784 Gm16570-201ENSMUST00000161951 436 ntBASIC12.99□□□□□ -0.33
Sox3P53784 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC12.99□□□□□ -0.33
Sox3P53784 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC12.99□□□□□ -0.33
Sox3P53784 Gm6944-201ENSMUST00000182449 1006 ntBASIC12.99□□□□□ -0.33
Sox3P53784 Gm27572-201ENSMUST00000183702 255 ntBASIC12.99□□□□□ -0.33
Sox3P53784 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Sox3P53784 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC12.99□□□□□ -0.33
Sox3P53784 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sox3P53784 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Sox3P53784 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sox3P53784 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sox3P53784 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sox3P53784 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sox3P53784 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sox3P53784 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Sox3P53784 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sox3P53784 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC12.99□□□□□ -0.33
Sox3P53784 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sox3P53784 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC12.99□□□□□ -0.33
Sox3P53784 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sox3P53784 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sox3P53784 Il17rd-203ENSMUST00000225146 3366 ntBASIC12.99□□□□□ -0.33
Sox3P53784 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sox3P53784 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC12.99□□□□□ -0.33
Sox3P53784 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sox3P53784 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sox3P53784 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Sox3P53784 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC12.99□□□□□ -0.33
Sox3P53784 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Sox3P53784 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sox3P53784 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sox3P53784 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sox3P53784 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Sox3P53784 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sox3P53784 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Sox3P53784 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Sox3P53784 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Sox3P53784 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sox3P53784 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sox3P53784 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Sox3P53784 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sox3P53784 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC12.98□□□□□ -0.33
Sox3P53784 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC12.98□□□□□ -0.33
Sox3P53784 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC12.98□□□□□ -0.33
Sox3P53784 Gm29127-201ENSMUST00000188304 517 ntBASIC12.98□□□□□ -0.33
Sox3P53784 Gm37466-201ENSMUST00000195692 652 ntBASIC12.98□□□□□ -0.33
Sox3P53784 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Sox3P53784 Gm6916-202ENSMUST00000205523 195 ntBASIC12.98□□□□□ -0.33
Sox3P53784 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Sox3P53784 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Sox3P53784 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sox3P53784 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sox3P53784 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sox3P53784 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Sox3P53784 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sox3P53784 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Sox3P53784 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sox3P53784 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC12.98□□□□□ -0.33
Sox3P53784 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sox3P53784 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sox3P53784 Gm12626-201ENSMUST00000117339 1983 ntBASIC12.98□□□□□ -0.33
Sox3P53784 Gm12623-201ENSMUST00000119849 1983 ntBASIC12.98□□□□□ -0.33
Sox3P53784 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC12.98□□□□□ -0.33
Sox3P53784 Gm5763-201ENSMUST00000155951 1530 ntBASIC12.98□□□□□ -0.33
Sox3P53784 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sox3P53784 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Sox3P53784 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sox3P53784 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sox3P53784 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Sox3P53784 AC121801.1-201ENSMUST00000225363 1899 ntBASIC12.97□□□□□ -0.33
Sox3P53784 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sox3P53784 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sox3P53784 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sox3P53784 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Sox3P53784 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sox3P53784 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sox3P53784 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sox3P53784 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sox3P53784 Gm23931-201ENSMUST00000103842 109 ntBASIC12.97□□□□□ -0.33
Sox3P53784 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
Sox3P53784 Cryge-202ENSMUST00000161960 690 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms