Protein–RNA interactions for Protein: P41233

Abca1, ATP-binding cassette sub-family A member 1, mousemouse

Predictions only

Length 2,261 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca1P41233 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC11.28□□□□□ -0.6
Abca1P41233 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Abca1P41233 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Abca1P41233 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Abca1P41233 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.6
Abca1P41233 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC11.27□□□□□ -0.6
Abca1P41233 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Abca1P41233 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Abca1P41233 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Abca1P41233 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC11.27□□□□□ -0.6
Abca1P41233 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC11.27□□□□□ -0.6
Abca1P41233 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Abca1P41233 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Abca1P41233 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Abca1P41233 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC11.27□□□□□ -0.61
Abca1P41233 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Abca1P41233 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Abca1P41233 Gm26464-201ENSMUST00000157094 305 ntBASIC11.27□□□□□ -0.61
Abca1P41233 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Abca1P41233 Fxyd1-217ENSMUST00000206860 594 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Abca1P41233 CU024892.2-201ENSMUST00000224608 832 ntBASIC11.27□□□□□ -0.61
Abca1P41233 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Abca1P41233 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Abca1P41233 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC11.27□□□□□ -0.61
Abca1P41233 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Abca1P41233 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Abca1P41233 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Abca1P41233 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Abca1P41233 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Abca1P41233 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Abca1P41233 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Abca1P41233 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Abca1P41233 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Abca1P41233 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Abca1P41233 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Abca1P41233 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
Abca1P41233 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Abca1P41233 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
Abca1P41233 Gm12384-201ENSMUST00000119228 919 ntBASIC11.26□□□□□ -0.61
Abca1P41233 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Abca1P41233 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Abca1P41233 Gm21470-201ENSMUST00000187680 696 ntBASIC11.26□□□□□ -0.61
Abca1P41233 Gm43094-201ENSMUST00000196549 921 ntBASIC11.26□□□□□ -0.61
Abca1P41233 Gm40466-201ENSMUST00000212174 422 ntBASIC11.26□□□□□ -0.61
Abca1P41233 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC11.26□□□□□ -0.61
Abca1P41233 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Abca1P41233 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
Abca1P41233 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Abca1P41233 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Abca1P41233 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Abca1P41233 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC11.26□□□□□ -0.61
Abca1P41233 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Abca1P41233 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Abca1P41233 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Abca1P41233 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Abca1P41233 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Abca1P41233 AC159649.2-201ENSMUST00000222984 3223 ntBASIC11.26□□□□□ -0.61
Abca1P41233 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Abca1P41233 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Abca1P41233 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Abca1P41233 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC11.26□□□□□ -0.61
Abca1P41233 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC11.26□□□□□ -0.61
Abca1P41233 Gm11791-201ENSMUST00000139327 336 ntTSL 3 BASIC11.26□□□□□ -0.61
Abca1P41233 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC11.26□□□□□ -0.61
Abca1P41233 Gm22331-201ENSMUST00000158066 136 ntBASIC11.26□□□□□ -0.61
Abca1P41233 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC11.26□□□□□ -0.61
Abca1P41233 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Abca1P41233 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Abca1P41233 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Abca1P41233 Gm18827-201ENSMUST00000188341 790 ntBASIC11.26□□□□□ -0.61
Abca1P41233 Gm33474-201ENSMUST00000199486 1231 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Abca1P41233 Gm8598-201ENSMUST00000221184 836 ntBASIC11.26□□□□□ -0.61
Abca1P41233 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Abca1P41233 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Abca1P41233 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Abca1P41233 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC11.26□□□□□ -0.61
Abca1P41233 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Abca1P41233 Gm18222-201ENSMUST00000202416 1387 ntBASIC11.26□□□□□ -0.61
Abca1P41233 Gm21038-201ENSMUST00000222205 1383 ntBASIC11.26□□□□□ -0.61
Abca1P41233 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC11.26□□□□□ -0.61
Abca1P41233 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Abca1P41233 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Abca1P41233 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Abca1P41233 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC11.26□□□□□ -0.61
Abca1P41233 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Abca1P41233 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Abca1P41233 Zscan30-202ENSMUST00000224144 1458 ntBASIC11.25□□□□□ -0.61
Abca1P41233 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC11.25□□□□□ -0.61
Abca1P41233 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC11.25□□□□□ -0.61
Abca1P41233 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC11.25□□□□□ -0.61
Abca1P41233 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC11.25□□□□□ -0.61
Abca1P41233 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC11.25□□□□□ -0.61
Abca1P41233 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Abca1P41233 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC11.25□□□□□ -0.61
Abca1P41233 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Abca1P41233 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Abca1P41233 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Abca1P41233 Gm13034-201ENSMUST00000121342 3177 ntBASIC11.25□□□□□ -0.61
Abca1P41233 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Abca1P41233 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 49.8 ms