Protein–RNA interactions for Protein: P35710

Sox5, Transcription factor SOX-5, mousemouse

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox5P35710 Gm5385-201ENSMUST00000118988 1559 ntBASIC14.8□□□□□ -0.04
Sox5P35710 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Sox5P35710 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Sox5P35710 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Sox5P35710 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC14.8□□□□□ -0.04
Sox5P35710 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Sox5P35710 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Sox5P35710 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Sox5P35710 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Sox5P35710 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Sox5P35710 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC14.8□□□□□ -0.04
Sox5P35710 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Sox5P35710 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Sox5P35710 Gm43273-201ENSMUST00000199649 2594 ntBASIC14.8□□□□□ -0.04
Sox5P35710 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Sox5P35710 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC14.79□□□□□ -0.04
Sox5P35710 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Sox5P35710 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Sox5P35710 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Sox5P35710 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Sox5P35710 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Sox5P35710 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Sox5P35710 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC14.79□□□□□ -0.04
Sox5P35710 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC14.79□□□□□ -0.04
Sox5P35710 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC14.79□□□□□ -0.04
Sox5P35710 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC14.79□□□□□ -0.04
Sox5P35710 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Sox5P35710 Gm6912-201ENSMUST00000117218 544 ntBASIC14.79□□□□□ -0.04
Sox5P35710 Gm13859-201ENSMUST00000119936 1423 ntBASIC14.79□□□□□ -0.04
Sox5P35710 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Sox5P35710 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC14.79□□□□□ -0.04
Sox5P35710 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC14.79□□□□□ -0.04
Sox5P35710 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Sox5P35710 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Sox5P35710 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC14.79□□□□□ -0.04
Sox5P35710 Gm7774-201ENSMUST00000200064 533 ntBASIC14.79□□□□□ -0.04
Sox5P35710 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Sox5P35710 CT943659.1-201ENSMUST00000215459 326 ntBASIC14.79□□□□□ -0.04
Sox5P35710 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Sox5P35710 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Sox5P35710 Gm3695-201ENSMUST00000087222 1009 ntBASIC14.79□□□□□ -0.04
Sox5P35710 Gm5989-201ENSMUST00000096092 2077 ntBASIC14.79□□□□□ -0.04
Sox5P35710 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Sox5P35710 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Sox5P35710 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Sox5P35710 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Sox5P35710 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Sox5P35710 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Sox5P35710 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sox5P35710 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sox5P35710 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sox5P35710 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sox5P35710 Ntrk2-204ENSMUST00000224259 3049 ntBASIC14.78□□□□□ -0.04
Sox5P35710 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Sox5P35710 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Sox5P35710 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
Sox5P35710 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sox5P35710 Mir449b-201ENSMUST00000104833 80 ntBASIC14.78□□□□□ -0.04
Sox5P35710 Gm8410-201ENSMUST00000117225 605 ntBASIC14.78□□□□□ -0.04
Sox5P35710 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sox5P35710 Gm15393-201ENSMUST00000120499 219 ntBASIC14.78□□□□□ -0.04
Sox5P35710 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC14.78□□□□□ -0.04
Sox5P35710 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Sox5P35710 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC14.78□□□□□ -0.04
Sox5P35710 Gm24420-201ENSMUST00000176676 59 ntBASIC14.78□□□□□ -0.04
Sox5P35710 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Sox5P35710 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC14.78□□□□□ -0.04
Sox5P35710 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Sox5P35710 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sox5P35710 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sox5P35710 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Sox5P35710 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Sox5P35710 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Sox5P35710 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Sox5P35710 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sox5P35710 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sox5P35710 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Sox5P35710 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Sox5P35710 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Sox5P35710 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sox5P35710 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sox5P35710 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Sox5P35710 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sox5P35710 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
Sox5P35710 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Sox5P35710 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Sox5P35710 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Sox5P35710 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Sox5P35710 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Sox5P35710 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Sox5P35710 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
Sox5P35710 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Sox5P35710 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC14.77□□□□□ -0.05
Sox5P35710 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
Sox5P35710 AC140397.2-201ENSMUST00000224213 834 ntBASIC14.77□□□□□ -0.05
Sox5P35710 Chchd1-203ENSMUST00000224633 557 ntBASIC14.77□□□□□ -0.05
Sox5P35710 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Sox5P35710 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Sox5P35710 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Sox5P35710 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms