Protein–RNA interactions for Protein: P35441

Thbs1, Thrombospondin-1, mousemouse

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thbs1P35441 Gm37015-201ENSMUST00000192763 1521 ntBASIC12.55□□□□□ -0.4
Thbs1P35441 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC12.55□□□□□ -0.4
Thbs1P35441 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Thbs1P35441 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Thbs1P35441 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Thbs1P35441 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Thbs1P35441 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Thbs1P35441 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Thbs1P35441 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Thbs1P35441 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Thbs1P35441 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Thbs1P35441 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Thbs1P35441 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Thbs1P35441 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Thbs1P35441 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Thbs1P35441 Gm4782-201ENSMUST00000168705 2046 ntBASIC12.54□□□□□ -0.4
Thbs1P35441 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC12.54□□□□□ -0.4
Thbs1P35441 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Thbs1P35441 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Thbs1P35441 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Thbs1P35441 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Thbs1P35441 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Thbs1P35441 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Thbs1P35441 Gm12151-201ENSMUST00000121374 290 ntBASIC12.54□□□□□ -0.4
Thbs1P35441 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC12.54□□□□□ -0.4
Thbs1P35441 Gm16275-201ENSMUST00000147774 712 ntTSL 3 BASIC12.54□□□□□ -0.4
Thbs1P35441 Mir7684-201ENSMUST00000183858 60 ntBASIC12.54□□□□□ -0.4
Thbs1P35441 Mir8102-201ENSMUST00000184148 139 ntBASIC12.54□□□□□ -0.4
Thbs1P35441 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Thbs1P35441 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC12.54□□□□□ -0.4
Thbs1P35441 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Thbs1P35441 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Thbs1P35441 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Thbs1P35441 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Thbs1P35441 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Thbs1P35441 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Thbs1P35441 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Thbs1P35441 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC12.54□□□□□ -0.4
Thbs1P35441 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Thbs1P35441 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Thbs1P35441 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Thbs1P35441 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Thbs1P35441 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Thbs1P35441 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Thbs1P35441 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Thbs1P35441 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Thbs1P35441 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Thbs1P35441 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Thbs1P35441 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Thbs1P35441 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Thbs1P35441 Gm37795-201ENSMUST00000194216 2459 ntBASIC12.53□□□□□ -0.4
Thbs1P35441 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Thbs1P35441 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Thbs1P35441 AC161252.3-201ENSMUST00000225465 1549 ntBASIC12.53□□□□□ -0.4
Thbs1P35441 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
Thbs1P35441 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Thbs1P35441 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Thbs1P35441 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Thbs1P35441 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Thbs1P35441 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Thbs1P35441 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Thbs1P35441 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Thbs1P35441 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Thbs1P35441 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
Thbs1P35441 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC12.53□□□□□ -0.4
Thbs1P35441 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
Thbs1P35441 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Thbs1P35441 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC12.53□□□□□ -0.4
Thbs1P35441 Gm27989-201ENSMUST00000184721 107 ntBASIC12.53□□□□□ -0.4
Thbs1P35441 Gm28510-201ENSMUST00000190572 928 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Thbs1P35441 Gm43377-201ENSMUST00000201640 455 ntBASIC12.53□□□□□ -0.4
Thbs1P35441 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC12.53□□□□□ -0.4
Thbs1P35441 Gm17795-201ENSMUST00000214505 757 ntBASIC12.53□□□□□ -0.4
Thbs1P35441 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Thbs1P35441 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Thbs1P35441 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Thbs1P35441 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Thbs1P35441 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Thbs1P35441 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Thbs1P35441 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Thbs1P35441 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Thbs1P35441 Gm44065-201ENSMUST00000203184 3527 ntBASIC12.53□□□□□ -0.4
Thbs1P35441 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Thbs1P35441 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Thbs1P35441 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Thbs1P35441 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Thbs1P35441 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC12.53□□□□□ -0.4
Thbs1P35441 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Thbs1P35441 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Thbs1P35441 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
Thbs1P35441 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Thbs1P35441 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Thbs1P35441 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC12.52□□□□□ -0.4
Thbs1P35441 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Thbs1P35441 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Thbs1P35441 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC12.52□□□□□ -0.41
Thbs1P35441 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Thbs1P35441 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Thbs1P35441 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Thbs1P35441 Gm7430-201ENSMUST00000193824 1144 ntBASIC12.52□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 49.3 ms