Protein–RNA interactions for Protein: P02463

Col4a1, Collagen alpha-1(IV) chain, mousemouse

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a1P02463 Gm13165-201ENSMUST00000152923 383 ntTSL 5 BASIC16.31■□□□□ 0.2
Col4a1P02463 Gm18916-201ENSMUST00000198264 1246 ntBASIC16.31■□□□□ 0.2
Col4a1P02463 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Col4a1P02463 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC16.31■□□□□ 0.2
Col4a1P02463 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Col4a1P02463 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Col4a1P02463 Mir433-201ENSMUST00000093564 124 ntBASIC16.31■□□□□ 0.2
Col4a1P02463 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Col4a1P02463 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Col4a1P02463 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Col4a1P02463 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Col4a1P02463 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Col4a1P02463 Gm4782-201ENSMUST00000168705 2046 ntBASIC16.31■□□□□ 0.2
Col4a1P02463 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Col4a1P02463 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Col4a1P02463 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Col4a1P02463 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Col4a1P02463 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Col4a1P02463 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Col4a1P02463 Gm11222-201ENSMUST00000119005 738 ntBASIC16.3■□□□□ 0.2
Col4a1P02463 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC16.3■□□□□ 0.2
Col4a1P02463 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC16.3■□□□□ 0.2
Col4a1P02463 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Col4a1P02463 Rps13-201ENSMUST00000170953 589 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Col4a1P02463 Gm5950-201ENSMUST00000213337 772 ntBASIC16.3■□□□□ 0.2
Col4a1P02463 CT030182.1-201ENSMUST00000225935 533 ntBASIC16.3■□□□□ 0.2
Col4a1P02463 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Col4a1P02463 Odf4-201ENSMUST00000038932 1078 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Col4a1P02463 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Col4a1P02463 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Col4a1P02463 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Col4a1P02463 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Col4a1P02463 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Col4a1P02463 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC16.3■□□□□ 0.2
Col4a1P02463 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Col4a1P02463 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC16.3■□□□□ 0.2
Col4a1P02463 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Col4a1P02463 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Col4a1P02463 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Col4a1P02463 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Col4a1P02463 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Col4a1P02463 Gm16505-201ENSMUST00000179981 232 ntBASIC16.3■□□□□ 0.2
Col4a1P02463 Gm4819-201ENSMUST00000182170 1009 ntBASIC16.3■□□□□ 0.2
Col4a1P02463 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC16.3■□□□□ 0.2
Col4a1P02463 Gm8885-201ENSMUST00000189382 598 ntBASIC16.3■□□□□ 0.2
Col4a1P02463 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC16.3■□□□□ 0.2
Col4a1P02463 Rps4l-202ENSMUST00000204242 789 ntBASIC16.3■□□□□ 0.2
Col4a1P02463 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Col4a1P02463 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Col4a1P02463 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Col4a1P02463 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Col4a1P02463 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Col4a1P02463 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Col4a1P02463 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Col4a1P02463 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Col4a1P02463 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC16.29■□□□□ 0.2
Col4a1P02463 0610037L13Rik-207ENSMUST00000125107 1551 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Col4a1P02463 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Col4a1P02463 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Col4a1P02463 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Col4a1P02463 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Col4a1P02463 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Col4a1P02463 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Col4a1P02463 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC16.29■□□□□ 0.2
Col4a1P02463 Gm13570-201ENSMUST00000140763 309 ntBASIC16.29■□□□□ 0.2
Col4a1P02463 Gm38317-201ENSMUST00000195564 343 ntBASIC16.29■□□□□ 0.2
Col4a1P02463 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC16.29■□□□□ 0.2
Col4a1P02463 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Col4a1P02463 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC16.29■□□□□ 0.2
Col4a1P02463 Gm45224-201ENSMUST00000208203 414 ntBASIC16.29■□□□□ 0.2
Col4a1P02463 Gm18615-201ENSMUST00000222919 1031 ntBASIC16.29■□□□□ 0.2
Col4a1P02463 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Col4a1P02463 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Col4a1P02463 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Col4a1P02463 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Col4a1P02463 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Col4a1P02463 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Col4a1P02463 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Col4a1P02463 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Col4a1P02463 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Col4a1P02463 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Col4a1P02463 Daam2-202ENSMUST00000224595 1926 ntBASIC16.28■□□□□ 0.2
Col4a1P02463 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Col4a1P02463 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC16.28■□□□□ 0.2
Col4a1P02463 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Col4a1P02463 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Col4a1P02463 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Col4a1P02463 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Col4a1P02463 Dctn6-203ENSMUST00000118811 934 ntTSL 3 BASIC16.28■□□□□ 0.2
Col4a1P02463 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
Col4a1P02463 Gm25732-201ENSMUST00000175168 60 ntBASIC16.28■□□□□ 0.2
Col4a1P02463 Mir3547-201ENSMUST00000175461 88 ntBASIC16.28■□□□□ 0.2
Col4a1P02463 Gm9061-201ENSMUST00000182707 1006 ntBASIC16.28■□□□□ 0.2
Col4a1P02463 Gm27341-201ENSMUST00000183570 106 ntBASIC16.28■□□□□ 0.2
Col4a1P02463 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC16.28■□□□□ 0.2
Col4a1P02463 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC16.28■□□□□ 0.2
Col4a1P02463 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Col4a1P02463 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Col4a1P02463 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Col4a1P02463 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms