Protein–RNA interactions for Protein: O88545

Cops6, COP9 signalosome complex subunit 6, mousemouse

Predictions only

Length 324 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops6O88545 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Cops6O88545 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Cops6O88545 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Cops6O88545 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.22
Cops6O88545 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
Cops6O88545 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Cops6O88545 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Cops6O88545 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Cops6O88545 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Cops6O88545 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC16.45■□□□□ 0.22
Cops6O88545 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Cops6O88545 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Cops6O88545 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Cops6O88545 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC16.45■□□□□ 0.22
Cops6O88545 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC16.45■□□□□ 0.22
Cops6O88545 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Cops6O88545 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC16.45■□□□□ 0.22
Cops6O88545 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC16.45■□□□□ 0.22
Cops6O88545 AC140406.1-201ENSMUST00000226481 465 ntBASIC16.45■□□□□ 0.22
Cops6O88545 Gm17383-201ENSMUST00000078739 1041 ntBASIC16.45■□□□□ 0.22
Cops6O88545 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Cops6O88545 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Cops6O88545 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Cops6O88545 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Cops6O88545 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Cops6O88545 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Cops6O88545 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Cops6O88545 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC16.45■□□□□ 0.22
Cops6O88545 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Cops6O88545 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
Cops6O88545 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Cops6O88545 Gm10676-201ENSMUST00000098778 3221 ntBASIC16.45■□□□□ 0.22
Cops6O88545 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Cops6O88545 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Cops6O88545 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Cops6O88545 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC16.45■□□□□ 0.22
Cops6O88545 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Cops6O88545 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Cops6O88545 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Cops6O88545 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Cops6O88545 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Cops6O88545 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC16.44■□□□□ 0.22
Cops6O88545 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Cops6O88545 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Cops6O88545 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Cops6O88545 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC16.44■□□□□ 0.22
Cops6O88545 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Cops6O88545 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Cops6O88545 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC16.44■□□□□ 0.22
Cops6O88545 Gm2231-201ENSMUST00000125661 612 ntBASIC16.44■□□□□ 0.22
Cops6O88545 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC16.44■□□□□ 0.22
Cops6O88545 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC16.44■□□□□ 0.22
Cops6O88545 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Cops6O88545 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC16.44■□□□□ 0.22
Cops6O88545 Gm27516-201ENSMUST00000184237 98 ntBASIC16.44■□□□□ 0.22
Cops6O88545 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC16.44■□□□□ 0.22
Cops6O88545 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC16.44■□□□□ 0.22
Cops6O88545 Rassf8-202ENSMUST00000058538 1131 ntBASIC16.44■□□□□ 0.22
Cops6O88545 Fxyd1-202ENSMUST00000071697 522 ntAPPRIS P1 TSL 3 BASIC16.44■□□□□ 0.22
Cops6O88545 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Cops6O88545 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Cops6O88545 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Cops6O88545 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Cops6O88545 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Cops6O88545 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Cops6O88545 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Cops6O88545 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Cops6O88545 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC16.44■□□□□ 0.22
Cops6O88545 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Cops6O88545 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Cops6O88545 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Cops6O88545 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Cops6O88545 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Cops6O88545 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Cops6O88545 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Cops6O88545 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Cops6O88545 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Cops6O88545 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Cops6O88545 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Cops6O88545 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Cops6O88545 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Cops6O88545 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Cops6O88545 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Cops6O88545 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Cops6O88545 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC16.43■□□□□ 0.22
Cops6O88545 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Cops6O88545 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Cops6O88545 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Cops6O88545 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Cops6O88545 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Cops6O88545 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Cops6O88545 Gm12329-201ENSMUST00000120829 1007 ntBASIC16.43■□□□□ 0.22
Cops6O88545 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC16.43■□□□□ 0.22
Cops6O88545 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC16.43■□□□□ 0.22
Cops6O88545 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Cops6O88545 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC16.43■□□□□ 0.22
Cops6O88545 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
Cops6O88545 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Cops6O88545 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
Cops6O88545 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 38.4 ms