Protein–RNA interactions for Protein: O55038

Cxcl13, C-X-C motif chemokine 13, mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl13O55038 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cxcl13O55038 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Cxcl13O55038 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cxcl13O55038 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Cxcl13O55038 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cxcl13O55038 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC11.42□□□□□ -0.58
Cxcl13O55038 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cxcl13O55038 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC11.42□□□□□ -0.58
Cxcl13O55038 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC11.42□□□□□ -0.58
Cxcl13O55038 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC11.42□□□□□ -0.58
Cxcl13O55038 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC11.42□□□□□ -0.58
Cxcl13O55038 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Cxcl13O55038 Gm9728-201ENSMUST00000200197 1055 ntBASIC11.42□□□□□ -0.58
Cxcl13O55038 AC173210.1-201ENSMUST00000222341 1131 ntBASIC11.42□□□□□ -0.58
Cxcl13O55038 CT573086.1-201ENSMUST00000227202 1074 ntBASIC11.42□□□□□ -0.58
Cxcl13O55038 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cxcl13O55038 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cxcl13O55038 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Cxcl13O55038 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cxcl13O55038 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cxcl13O55038 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC11.42□□□□□ -0.58
Cxcl13O55038 Gm38197-201ENSMUST00000192320 2122 ntBASIC11.42□□□□□ -0.58
Cxcl13O55038 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cxcl13O55038 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cxcl13O55038 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Cxcl13O55038 Gm7553-201ENSMUST00000185805 1426 ntBASIC11.42□□□□□ -0.58
Cxcl13O55038 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cxcl13O55038 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC11.42□□□□□ -0.58
Cxcl13O55038 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC11.42□□□□□ -0.58
Cxcl13O55038 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC11.42□□□□□ -0.58
Cxcl13O55038 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cxcl13O55038 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Cxcl13O55038 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cxcl13O55038 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cxcl13O55038 Gm42872-201ENSMUST00000200026 1967 ntBASIC11.41□□□□□ -0.58
Cxcl13O55038 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Cxcl13O55038 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cxcl13O55038 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cxcl13O55038 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
Cxcl13O55038 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Cxcl13O55038 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cxcl13O55038 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Cxcl13O55038 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cxcl13O55038 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Cxcl13O55038 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cxcl13O55038 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cxcl13O55038 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cxcl13O55038 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Cxcl13O55038 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC11.41□□□□□ -0.58
Cxcl13O55038 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC11.41□□□□□ -0.58
Cxcl13O55038 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Cxcl13O55038 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Cxcl13O55038 AC126253.1-201ENSMUST00000227974 824 ntBASIC11.41□□□□□ -0.58
Cxcl13O55038 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cxcl13O55038 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Cxcl13O55038 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cxcl13O55038 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cxcl13O55038 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cxcl13O55038 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cxcl13O55038 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Cxcl13O55038 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cxcl13O55038 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
Cxcl13O55038 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC11.41□□□□□ -0.58
Cxcl13O55038 Abhd6-203ENSMUST00000225234 1958 ntBASIC11.41□□□□□ -0.58
Cxcl13O55038 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cxcl13O55038 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cxcl13O55038 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cxcl13O55038 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Cxcl13O55038 Gm37133-201ENSMUST00000192705 1922 ntBASIC11.41□□□□□ -0.58
Cxcl13O55038 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Cxcl13O55038 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Cxcl13O55038 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC11.4□□□□□ -0.58
Cxcl13O55038 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
Cxcl13O55038 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Cxcl13O55038 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Cxcl13O55038 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
Cxcl13O55038 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Cxcl13O55038 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Cxcl13O55038 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Cxcl13O55038 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Cxcl13O55038 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Cxcl13O55038 Gm16177-201ENSMUST00000120728 718 ntBASIC11.4□□□□□ -0.58
Cxcl13O55038 Gm8062-201ENSMUST00000139696 444 ntBASIC11.4□□□□□ -0.58
Cxcl13O55038 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Cxcl13O55038 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Cxcl13O55038 Gm2639-201ENSMUST00000156881 1297 ntBASIC11.4□□□□□ -0.58
Cxcl13O55038 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Cxcl13O55038 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC11.4□□□□□ -0.58
Cxcl13O55038 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC11.4□□□□□ -0.58
Cxcl13O55038 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Cxcl13O55038 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC11.4□□□□□ -0.58
Cxcl13O55038 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Cxcl13O55038 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC11.4□□□□□ -0.58
Cxcl13O55038 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Cxcl13O55038 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Cxcl13O55038 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Cxcl13O55038 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Cxcl13O55038 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Cxcl13O55038 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Cxcl13O55038 Gm43056-201ENSMUST00000197865 2791 ntBASIC11.4□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms