Protein–RNA interactions for Protein: O35604

Npc1, Niemann-Pick C1 protein, mousemouse

Predictions only

Length 1,277 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npc1O35604 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Npc1O35604 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Npc1O35604 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Npc1O35604 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Npc1O35604 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Npc1O35604 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Npc1O35604 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Npc1O35604 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC13.22□□□□□ -0.29
Npc1O35604 Gm15371-201ENSMUST00000117057 784 ntBASIC13.22□□□□□ -0.29
Npc1O35604 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Npc1O35604 Gm9002-201ENSMUST00000178437 499 ntBASIC13.22□□□□□ -0.29
Npc1O35604 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Npc1O35604 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC13.22□□□□□ -0.29
Npc1O35604 Gm45384-201ENSMUST00000210451 277 ntBASIC13.22□□□□□ -0.29
Npc1O35604 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC13.22□□□□□ -0.29
Npc1O35604 AC155252.1-201ENSMUST00000226462 1208 ntBASIC13.22□□□□□ -0.29
Npc1O35604 AC125117.1-201ENSMUST00000228121 468 ntBASIC13.22□□□□□ -0.29
Npc1O35604 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC13.22□□□□□ -0.29
Npc1O35604 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Npc1O35604 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC13.22□□□□□ -0.29
Npc1O35604 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Npc1O35604 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Npc1O35604 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Npc1O35604 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Npc1O35604 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Npc1O35604 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC13.22□□□□□ -0.29
Npc1O35604 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Npc1O35604 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Npc1O35604 Grk6-205ENSMUST00000224653 2976 ntBASIC13.22□□□□□ -0.29
Npc1O35604 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Npc1O35604 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Npc1O35604 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Npc1O35604 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Npc1O35604 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Npc1O35604 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Npc1O35604 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Npc1O35604 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Npc1O35604 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Npc1O35604 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Npc1O35604 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC13.21□□□□□ -0.29
Npc1O35604 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Npc1O35604 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Npc1O35604 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Npc1O35604 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Npc1O35604 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC13.21□□□□□ -0.29
Npc1O35604 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Npc1O35604 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Npc1O35604 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Npc1O35604 Gm15806-201ENSMUST00000120696 955 ntBASIC13.21□□□□□ -0.29
Npc1O35604 Gm26464-201ENSMUST00000157094 305 ntBASIC13.21□□□□□ -0.29
Npc1O35604 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Npc1O35604 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC13.21□□□□□ -0.29
Npc1O35604 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Npc1O35604 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC13.21□□□□□ -0.29
Npc1O35604 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Npc1O35604 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Npc1O35604 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC13.21□□□□□ -0.29
Npc1O35604 AC192088.1-201ENSMUST00000227561 301 ntBASIC13.21□□□□□ -0.29
Npc1O35604 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Npc1O35604 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Npc1O35604 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Npc1O35604 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Npc1O35604 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Npc1O35604 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Npc1O35604 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC13.21□□□□□ -0.29
Npc1O35604 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Npc1O35604 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Npc1O35604 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Npc1O35604 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Npc1O35604 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Npc1O35604 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.3
Npc1O35604 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Npc1O35604 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Npc1O35604 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Npc1O35604 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Npc1O35604 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Npc1O35604 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Npc1O35604 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Npc1O35604 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Npc1O35604 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Npc1O35604 Gm43364-201ENSMUST00000196046 3274 ntBASIC13.2□□□□□ -0.3
Npc1O35604 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Npc1O35604 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Npc1O35604 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC13.2□□□□□ -0.3
Npc1O35604 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Npc1O35604 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
Npc1O35604 Gm12485-201ENSMUST00000119641 291 ntBASIC13.2□□□□□ -0.3
Npc1O35604 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC13.2□□□□□ -0.3
Npc1O35604 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Npc1O35604 Gm28911-201ENSMUST00000188837 117 ntBASIC13.2□□□□□ -0.3
Npc1O35604 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC13.2□□□□□ -0.3
Npc1O35604 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Npc1O35604 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Npc1O35604 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Npc1O35604 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Npc1O35604 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Npc1O35604 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Npc1O35604 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC13.2□□□□□ -0.3
Npc1O35604 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Npc1O35604 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 54.7 ms