Protein–RNA interactions for Protein: O35393

Efnb3, Ephrin-B3, mousemouse

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Efnb3O35393 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Efnb3O35393 AC159196.2-201ENSMUST00000224082 1622 ntBASIC10.71□□□□□ -0.69
Efnb3O35393 AC114543.1-201ENSMUST00000226451 1558 ntBASIC10.71□□□□□ -0.69
Efnb3O35393 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Efnb3O35393 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Efnb3O35393 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.69
Efnb3O35393 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Efnb3O35393 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Efnb3O35393 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Efnb3O35393 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Efnb3O35393 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Efnb3O35393 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC10.71□□□□□ -0.69
Efnb3O35393 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC10.71□□□□□ -0.7
Efnb3O35393 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC10.71□□□□□ -0.7
Efnb3O35393 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.7
Efnb3O35393 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Efnb3O35393 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Efnb3O35393 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC10.71□□□□□ -0.7
Efnb3O35393 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC10.71□□□□□ -0.7
Efnb3O35393 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.7
Efnb3O35393 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Efnb3O35393 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.7
Efnb3O35393 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Efnb3O35393 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Efnb3O35393 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Efnb3O35393 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Efnb3O35393 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Efnb3O35393 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Efnb3O35393 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Efnb3O35393 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Efnb3O35393 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Efnb3O35393 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
Efnb3O35393 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Efnb3O35393 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
Efnb3O35393 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC10.7□□□□□ -0.7
Efnb3O35393 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Efnb3O35393 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Efnb3O35393 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Efnb3O35393 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Efnb3O35393 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
Efnb3O35393 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC10.7□□□□□ -0.7
Efnb3O35393 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Efnb3O35393 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Efnb3O35393 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Efnb3O35393 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC10.7□□□□□ -0.7
Efnb3O35393 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC10.7□□□□□ -0.7
Efnb3O35393 Gm6222-201ENSMUST00000120787 396 ntBASIC10.7□□□□□ -0.7
Efnb3O35393 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC10.7□□□□□ -0.7
Efnb3O35393 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC10.7□□□□□ -0.7
Efnb3O35393 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC10.7□□□□□ -0.7
Efnb3O35393 Gm37714-201ENSMUST00000194742 342 ntBASIC10.7□□□□□ -0.7
Efnb3O35393 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC10.7□□□□□ -0.7
Efnb3O35393 AC166341.4-201ENSMUST00000220625 123 ntBASIC10.7□□□□□ -0.7
Efnb3O35393 AC124549.3-201ENSMUST00000225541 367 ntBASIC10.7□□□□□ -0.7
Efnb3O35393 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Efnb3O35393 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Efnb3O35393 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Efnb3O35393 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC10.7□□□□□ -0.7
Efnb3O35393 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Efnb3O35393 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Efnb3O35393 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Efnb3O35393 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC10.7□□□□□ -0.7
Efnb3O35393 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Efnb3O35393 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Efnb3O35393 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC10.7□□□□□ -0.7
Efnb3O35393 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
Efnb3O35393 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Efnb3O35393 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC10.7□□□□□ -0.7
Efnb3O35393 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC10.7□□□□□ -0.7
Efnb3O35393 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC10.7□□□□□ -0.7
Efnb3O35393 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
Efnb3O35393 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Efnb3O35393 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC10.69□□□□□ -0.7
Efnb3O35393 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC10.69□□□□□ -0.7
Efnb3O35393 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC10.69□□□□□ -0.7
Efnb3O35393 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
Efnb3O35393 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Efnb3O35393 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Efnb3O35393 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC10.69□□□□□ -0.7
Efnb3O35393 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Efnb3O35393 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Efnb3O35393 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Efnb3O35393 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
Efnb3O35393 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Efnb3O35393 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
Efnb3O35393 AC155298.2-201ENSMUST00000225485 6226 ntBASIC10.69□□□□□ -0.7
Efnb3O35393 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Efnb3O35393 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Efnb3O35393 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC10.69□□□□□ -0.7
Efnb3O35393 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Efnb3O35393 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Efnb3O35393 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Efnb3O35393 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC10.69□□□□□ -0.7
Efnb3O35393 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC10.69□□□□□ -0.7
Efnb3O35393 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Efnb3O35393 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Efnb3O35393 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC10.69□□□□□ -0.7
Efnb3O35393 Gm4995-201ENSMUST00000117247 432 ntBASIC10.69□□□□□ -0.7
Efnb3O35393 Gm2810-201ENSMUST00000118681 990 ntBASIC10.69□□□□□ -0.7
Efnb3O35393 Gm12017-201ENSMUST00000122453 1003 ntBASIC10.69□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 53.4 ms