Protein–RNA interactions for Protein: F8VPK8

Pcdh9, Protocadherin 9, mousemouse

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh9F8VPK8 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdh9F8VPK8 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC13.9□□□□□ -0.18
Pcdh9F8VPK8 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC13.9□□□□□ -0.18
Pcdh9F8VPK8 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC13.9□□□□□ -0.18
Pcdh9F8VPK8 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdh9F8VPK8 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdh9F8VPK8 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdh9F8VPK8 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdh9F8VPK8 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdh9F8VPK8 Gm15678-201ENSMUST00000117573 960 ntBASIC13.9□□□□□ -0.18
Pcdh9F8VPK8 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
Pcdh9F8VPK8 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC13.9□□□□□ -0.18
Pcdh9F8VPK8 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdh9F8VPK8 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
Pcdh9F8VPK8 Gm44344-201ENSMUST00000200287 129 ntBASIC13.9□□□□□ -0.18
Pcdh9F8VPK8 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdh9F8VPK8 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdh9F8VPK8 AC154621.1-201ENSMUST00000226155 1119 ntBASIC13.9□□□□□ -0.18
Pcdh9F8VPK8 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdh9F8VPK8 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Pcdh9F8VPK8 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdh9F8VPK8 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdh9F8VPK8 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Pcdh9F8VPK8 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC13.9□□□□□ -0.19
Pcdh9F8VPK8 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC13.9□□□□□ -0.19
Pcdh9F8VPK8 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdh9F8VPK8 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdh9F8VPK8 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdh9F8VPK8 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC13.89□□□□□ -0.19
Pcdh9F8VPK8 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdh9F8VPK8 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdh9F8VPK8 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdh9F8VPK8 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdh9F8VPK8 Syt7-205ENSMUST00000224135 1557 ntBASIC13.89□□□□□ -0.19
Pcdh9F8VPK8 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdh9F8VPK8 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC13.89□□□□□ -0.19
Pcdh9F8VPK8 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdh9F8VPK8 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdh9F8VPK8 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC13.89□□□□□ -0.19
Pcdh9F8VPK8 Gm27321-201ENSMUST00000185021 205 ntBASIC13.89□□□□□ -0.19
Pcdh9F8VPK8 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC13.89□□□□□ -0.19
Pcdh9F8VPK8 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdh9F8VPK8 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdh9F8VPK8 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdh9F8VPK8 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdh9F8VPK8 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdh9F8VPK8 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC13.89□□□□□ -0.19
Pcdh9F8VPK8 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdh9F8VPK8 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdh9F8VPK8 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdh9F8VPK8 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdh9F8VPK8 Gm43423-201ENSMUST00000198390 2094 ntBASIC13.89□□□□□ -0.19
Pcdh9F8VPK8 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdh9F8VPK8 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdh9F8VPK8 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdh9F8VPK8 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC13.89□□□□□ -0.19
Pcdh9F8VPK8 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC13.88□□□□□ -0.19
Pcdh9F8VPK8 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdh9F8VPK8 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Pcdh9F8VPK8 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdh9F8VPK8 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdh9F8VPK8 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
Pcdh9F8VPK8 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdh9F8VPK8 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdh9F8VPK8 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdh9F8VPK8 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdh9F8VPK8 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdh9F8VPK8 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdh9F8VPK8 Gm15240-201ENSMUST00000118156 720 ntBASIC13.88□□□□□ -0.19
Pcdh9F8VPK8 Gm14767-201ENSMUST00000121559 586 ntBASIC13.88□□□□□ -0.19
Pcdh9F8VPK8 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC13.88□□□□□ -0.19
Pcdh9F8VPK8 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdh9F8VPK8 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
Pcdh9F8VPK8 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdh9F8VPK8 AC126408.1-201ENSMUST00000225184 523 ntBASIC13.88□□□□□ -0.19
Pcdh9F8VPK8 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdh9F8VPK8 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdh9F8VPK8 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC13.88□□□□□ -0.19
Pcdh9F8VPK8 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
Pcdh9F8VPK8 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC13.88□□□□□ -0.19
Pcdh9F8VPK8 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Pcdh9F8VPK8 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
Pcdh9F8VPK8 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdh9F8VPK8 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdh9F8VPK8 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdh9F8VPK8 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Pcdh9F8VPK8 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdh9F8VPK8 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdh9F8VPK8 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdh9F8VPK8 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdh9F8VPK8 Gm7002-201ENSMUST00000221386 2165 ntBASIC13.88□□□□□ -0.19
Pcdh9F8VPK8 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Pcdh9F8VPK8 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Pcdh9F8VPK8 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Pcdh9F8VPK8 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Pcdh9F8VPK8 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Pcdh9F8VPK8 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Pcdh9F8VPK8 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Pcdh9F8VPK8 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Pcdh9F8VPK8 Gm45706-201ENSMUST00000213063 2136 ntBASIC13.87□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 65.6 ms