Protein–RNA interactions for Protein: E9Q5G2

Pcdhb9, Protocadherin beta 9, mousemouse

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb9E9Q5G2 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdhb9E9Q5G2 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdhb9E9Q5G2 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdhb9E9Q5G2 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdhb9E9Q5G2 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC15.89■□□□□ 0.13
Pcdhb9E9Q5G2 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdhb9E9Q5G2 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdhb9E9Q5G2 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC15.89■□□□□ 0.13
Pcdhb9E9Q5G2 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC15.89■□□□□ 0.13
Pcdhb9E9Q5G2 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC15.89■□□□□ 0.13
Pcdhb9E9Q5G2 Proscos-202ENSMUST00000178990 666 ntBASIC15.89■□□□□ 0.13
Pcdhb9E9Q5G2 Gm27486-201ENSMUST00000184923 80 ntBASIC15.89■□□□□ 0.13
Pcdhb9E9Q5G2 Gm44799-201ENSMUST00000207639 1202 ntBASIC15.89■□□□□ 0.13
Pcdhb9E9Q5G2 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC15.89■□□□□ 0.13
Pcdhb9E9Q5G2 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdhb9E9Q5G2 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdhb9E9Q5G2 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC15.89■□□□□ 0.13
Pcdhb9E9Q5G2 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdhb9E9Q5G2 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdhb9E9Q5G2 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdhb9E9Q5G2 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdhb9E9Q5G2 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdhb9E9Q5G2 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdhb9E9Q5G2 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdhb9E9Q5G2 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdhb9E9Q5G2 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
Pcdhb9E9Q5G2 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdhb9E9Q5G2 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdhb9E9Q5G2 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdhb9E9Q5G2 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdhb9E9Q5G2 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
Pcdhb9E9Q5G2 AC096628.2-201ENSMUST00000225443 1413 ntBASIC15.88■□□□□ 0.13
Pcdhb9E9Q5G2 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdhb9E9Q5G2 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdhb9E9Q5G2 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdhb9E9Q5G2 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdhb9E9Q5G2 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC15.88■□□□□ 0.13
Pcdhb9E9Q5G2 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdhb9E9Q5G2 Gm24196-201ENSMUST00000179161 110 ntBASIC15.88■□□□□ 0.13
Pcdhb9E9Q5G2 Gm9124-201ENSMUST00000191789 1092 ntBASIC15.88■□□□□ 0.13
Pcdhb9E9Q5G2 Gm9113-201ENSMUST00000192510 1018 ntBASIC15.88■□□□□ 0.13
Pcdhb9E9Q5G2 Gm9131-201ENSMUST00000193557 1089 ntBASIC15.88■□□□□ 0.13
Pcdhb9E9Q5G2 Gm9121-201ENSMUST00000193749 1071 ntBASIC15.88■□□□□ 0.13
Pcdhb9E9Q5G2 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC15.88■□□□□ 0.13
Pcdhb9E9Q5G2 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdhb9E9Q5G2 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdhb9E9Q5G2 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC15.88■□□□□ 0.13
Pcdhb9E9Q5G2 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdhb9E9Q5G2 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdhb9E9Q5G2 Gm43399-201ENSMUST00000202546 2374 ntBASIC15.88■□□□□ 0.13
Pcdhb9E9Q5G2 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdhb9E9Q5G2 Gm4782-201ENSMUST00000168705 2046 ntBASIC15.88■□□□□ 0.13
Pcdhb9E9Q5G2 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdhb9E9Q5G2 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC15.88■□□□□ 0.13
Pcdhb9E9Q5G2 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdhb9E9Q5G2 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdhb9E9Q5G2 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
Pcdhb9E9Q5G2 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC15.88■□□□□ 0.13
Pcdhb9E9Q5G2 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC15.88■□□□□ 0.13
Pcdhb9E9Q5G2 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdhb9E9Q5G2 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
Pcdhb9E9Q5G2 Abhd6-203ENSMUST00000225234 1958 ntBASIC15.87■□□□□ 0.13
Pcdhb9E9Q5G2 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC15.87■□□□□ 0.13
Pcdhb9E9Q5G2 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC15.87■□□□□ 0.13
Pcdhb9E9Q5G2 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdhb9E9Q5G2 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC15.87■□□□□ 0.13
Pcdhb9E9Q5G2 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdhb9E9Q5G2 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdhb9E9Q5G2 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdhb9E9Q5G2 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdhb9E9Q5G2 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdhb9E9Q5G2 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdhb9E9Q5G2 Gm6447-201ENSMUST00000118905 835 ntBASIC15.87■□□□□ 0.13
Pcdhb9E9Q5G2 Gm11803-201ENSMUST00000119966 444 ntBASIC15.87■□□□□ 0.13
Pcdhb9E9Q5G2 Gm10156-201ENSMUST00000122364 462 ntBASIC15.87■□□□□ 0.13
Pcdhb9E9Q5G2 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
Pcdhb9E9Q5G2 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdhb9E9Q5G2 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdhb9E9Q5G2 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdhb9E9Q5G2 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC15.87■□□□□ 0.13
Pcdhb9E9Q5G2 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdhb9E9Q5G2 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdhb9E9Q5G2 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdhb9E9Q5G2 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC15.87■□□□□ 0.13
Pcdhb9E9Q5G2 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdhb9E9Q5G2 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdhb9E9Q5G2 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdhb9E9Q5G2 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC15.87■□□□□ 0.13
Pcdhb9E9Q5G2 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdhb9E9Q5G2 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdhb9E9Q5G2 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC15.87■□□□□ 0.13
Pcdhb9E9Q5G2 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdhb9E9Q5G2 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdhb9E9Q5G2 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdhb9E9Q5G2 Gm18630-201ENSMUST00000222109 1397 ntBASIC15.87■□□□□ 0.13
Pcdhb9E9Q5G2 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdhb9E9Q5G2 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdhb9E9Q5G2 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdhb9E9Q5G2 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdhb9E9Q5G2 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 96.3 ms