Protein–RNA interactions for Protein: A0N8R1

Trav12-1, T cell receptor alpha variable 12-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12-1A0N8R1 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC11.31□□□□□ -0.6
Trav12-1A0N8R1 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Trav12-1A0N8R1 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Trav12-1A0N8R1 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Trav12-1A0N8R1 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Trav12-1A0N8R1 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Trav12-1A0N8R1 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Trav12-1A0N8R1 Gm44771-201ENSMUST00000206975 626 ntBASIC11.31□□□□□ -0.6
Trav12-1A0N8R1 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Trav12-1A0N8R1 Gm5779-201ENSMUST00000218467 910 ntBASIC11.31□□□□□ -0.6
Trav12-1A0N8R1 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC11.31□□□□□ -0.6
Trav12-1A0N8R1 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav12-1A0N8R1 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Trav12-1A0N8R1 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC11.31□□□□□ -0.6
Trav12-1A0N8R1 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav12-1A0N8R1 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav12-1A0N8R1 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav12-1A0N8R1 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav12-1A0N8R1 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav12-1A0N8R1 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC11.31□□□□□ -0.6
Trav12-1A0N8R1 Gm5648-201ENSMUST00000122244 1587 ntBASIC11.31□□□□□ -0.6
Trav12-1A0N8R1 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Trav12-1A0N8R1 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav12-1A0N8R1 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Trav12-1A0N8R1 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav12-1A0N8R1 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav12-1A0N8R1 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav12-1A0N8R1 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Trav12-1A0N8R1 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav12-1A0N8R1 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav12-1A0N8R1 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Trav12-1A0N8R1 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC11.31□□□□□ -0.6
Trav12-1A0N8R1 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Trav12-1A0N8R1 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Trav12-1A0N8R1 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Trav12-1A0N8R1 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav12-1A0N8R1 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC11.31□□□□□ -0.6
Trav12-1A0N8R1 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC11.31□□□□□ -0.6
Trav12-1A0N8R1 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav12-1A0N8R1 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav12-1A0N8R1 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav12-1A0N8R1 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Trav12-1A0N8R1 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Trav12-1A0N8R1 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Trav12-1A0N8R1 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Trav12-1A0N8R1 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav12-1A0N8R1 Gm10176-201ENSMUST00000159707 2264 ntBASIC11.3□□□□□ -0.6
Trav12-1A0N8R1 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Trav12-1A0N8R1 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC11.3□□□□□ -0.6
Trav12-1A0N8R1 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav12-1A0N8R1 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav12-1A0N8R1 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav12-1A0N8R1 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav12-1A0N8R1 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav12-1A0N8R1 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav12-1A0N8R1 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav12-1A0N8R1 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Trav12-1A0N8R1 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav12-1A0N8R1 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav12-1A0N8R1 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav12-1A0N8R1 Gm15770-201ENSMUST00000117498 584 ntBASIC11.3□□□□□ -0.6
Trav12-1A0N8R1 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav12-1A0N8R1 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC11.3□□□□□ -0.6
Trav12-1A0N8R1 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Trav12-1A0N8R1 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Trav12-1A0N8R1 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Trav12-1A0N8R1 Gm27533-201ENSMUST00000183800 152 ntBASIC11.3□□□□□ -0.6
Trav12-1A0N8R1 AC225888.1-201ENSMUST00000227184 728 ntBASIC11.3□□□□□ -0.6
Trav12-1A0N8R1 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav12-1A0N8R1 Gm3695-201ENSMUST00000087222 1009 ntBASIC11.3□□□□□ -0.6
Trav12-1A0N8R1 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav12-1A0N8R1 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC11.3□□□□□ -0.6
Trav12-1A0N8R1 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav12-1A0N8R1 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Trav12-1A0N8R1 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav12-1A0N8R1 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Trav12-1A0N8R1 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav12-1A0N8R1 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav12-1A0N8R1 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav12-1A0N8R1 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav12-1A0N8R1 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav12-1A0N8R1 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav12-1A0N8R1 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav12-1A0N8R1 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Trav12-1A0N8R1 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav12-1A0N8R1 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Trav12-1A0N8R1 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav12-1A0N8R1 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Trav12-1A0N8R1 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav12-1A0N8R1 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav12-1A0N8R1 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav12-1A0N8R1 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Trav12-1A0N8R1 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC11.29□□□□□ -0.6
Trav12-1A0N8R1 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav12-1A0N8R1 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Trav12-1A0N8R1 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav12-1A0N8R1 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC11.29□□□□□ -0.6
Trav12-1A0N8R1 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Trav12-1A0N8R1 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav12-1A0N8R1 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms