Protein–RNA interactions for Protein: A0A0G2JEM0

Trav3n-3, T cell receptor alpha variable 3D-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3n-3A0A0G2JEM0 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trav3n-3A0A0G2JEM0 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Trav3n-3A0A0G2JEM0 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trav3n-3A0A0G2JEM0 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trav3n-3A0A0G2JEM0 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trav3n-3A0A0G2JEM0 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Trav3n-3A0A0G2JEM0 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Trav3n-3A0A0G2JEM0 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trav3n-3A0A0G2JEM0 Lbh-201ENSMUST00000024857 3064 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trav3n-3A0A0G2JEM0 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trav3n-3A0A0G2JEM0 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trav3n-3A0A0G2JEM0 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trav3n-3A0A0G2JEM0 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trav3n-3A0A0G2JEM0 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trav3n-3A0A0G2JEM0 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trav3n-3A0A0G2JEM0 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trav3n-3A0A0G2JEM0 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Trav3n-3A0A0G2JEM0 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trav3n-3A0A0G2JEM0 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC10.26□□□□□ -0.77
Trav3n-3A0A0G2JEM0 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trav3n-3A0A0G2JEM0 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Trav3n-3A0A0G2JEM0 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trav3n-3A0A0G2JEM0 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trav3n-3A0A0G2JEM0 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC10.25□□□□□ -0.77
Trav3n-3A0A0G2JEM0 Hdc-201ENSMUST00000028838 2392 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trav3n-3A0A0G2JEM0 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trav3n-3A0A0G2JEM0 Dpysl5-201ENSMUST00000088081 5022 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trav3n-3A0A0G2JEM0 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trav3n-3A0A0G2JEM0 Rspry1-201ENSMUST00000060389 3852 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trav3n-3A0A0G2JEM0 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trav3n-3A0A0G2JEM0 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC10.25□□□□□ -0.77
Trav3n-3A0A0G2JEM0 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trav3n-3A0A0G2JEM0 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trav3n-3A0A0G2JEM0 Gm44891-201ENSMUST00000208817 2223 ntBASIC10.25□□□□□ -0.77
Trav3n-3A0A0G2JEM0 Pcnx2-201ENSMUST00000047239 7236 ntAPPRIS P1 TSL 5 BASIC10.25□□□□□ -0.77
Trav3n-3A0A0G2JEM0 Xpot-203ENSMUST00000218004 6005 ntAPPRIS P1 TSL 5 BASIC10.25□□□□□ -0.77
Trav3n-3A0A0G2JEM0 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC10.25□□□□□ -0.77
Trav3n-3A0A0G2JEM0 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trav3n-3A0A0G2JEM0 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trav3n-3A0A0G2JEM0 Tcf21-202ENSMUST00000218002 1788 ntBASIC10.25□□□□□ -0.77
Trav3n-3A0A0G2JEM0 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trav3n-3A0A0G2JEM0 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trav3n-3A0A0G2JEM0 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC10.25□□□□□ -0.77
Trav3n-3A0A0G2JEM0 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trav3n-3A0A0G2JEM0 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC10.25□□□□□ -0.77
Trav3n-3A0A0G2JEM0 Gm11452-201ENSMUST00000122376 690 ntBASIC10.25□□□□□ -0.77
Trav3n-3A0A0G2JEM0 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC10.25□□□□□ -0.77
Trav3n-3A0A0G2JEM0 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC10.25□□□□□ -0.77
Trav3n-3A0A0G2JEM0 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC10.25□□□□□ -0.77
Trav3n-3A0A0G2JEM0 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Trav3n-3A0A0G2JEM0 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Trav3n-3A0A0G2JEM0 Gm10275-202ENSMUST00000168697 495 ntBASIC10.25□□□□□ -0.77
Trav3n-3A0A0G2JEM0 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC10.25□□□□□ -0.77
Trav3n-3A0A0G2JEM0 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC10.25□□□□□ -0.77
Trav3n-3A0A0G2JEM0 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC10.25□□□□□ -0.77
Trav3n-3A0A0G2JEM0 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC10.25□□□□□ -0.77
Trav3n-3A0A0G2JEM0 Gm15590-201ENSMUST00000078419 552 ntBASIC10.25□□□□□ -0.77
Trav3n-3A0A0G2JEM0 Gm10275-201ENSMUST00000092620 635 ntBASIC10.25□□□□□ -0.77
Trav3n-3A0A0G2JEM0 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trav3n-3A0A0G2JEM0 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC10.25□□□□□ -0.77
Trav3n-3A0A0G2JEM0 Cd276-202ENSMUST00000165365 3603 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trav3n-3A0A0G2JEM0 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trav3n-3A0A0G2JEM0 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC10.25□□□□□ -0.77
Trav3n-3A0A0G2JEM0 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC10.25□□□□□ -0.77
Trav3n-3A0A0G2JEM0 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trav3n-3A0A0G2JEM0 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trav3n-3A0A0G2JEM0 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trav3n-3A0A0G2JEM0 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Trav3n-3A0A0G2JEM0 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trav3n-3A0A0G2JEM0 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trav3n-3A0A0G2JEM0 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC10.25□□□□□ -0.77
Trav3n-3A0A0G2JEM0 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trav3n-3A0A0G2JEM0 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC10.25□□□□□ -0.77
Trav3n-3A0A0G2JEM0 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC10.25□□□□□ -0.77
Trav3n-3A0A0G2JEM0 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trav3n-3A0A0G2JEM0 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trav3n-3A0A0G2JEM0 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC10.25□□□□□ -0.77
Trav3n-3A0A0G2JEM0 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trav3n-3A0A0G2JEM0 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC10.24□□□□□ -0.77
Trav3n-3A0A0G2JEM0 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trav3n-3A0A0G2JEM0 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trav3n-3A0A0G2JEM0 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Trav3n-3A0A0G2JEM0 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC10.24□□□□□ -0.77
Trav3n-3A0A0G2JEM0 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trav3n-3A0A0G2JEM0 Rbms1-201ENSMUST00000028347 4436 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trav3n-3A0A0G2JEM0 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trav3n-3A0A0G2JEM0 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trav3n-3A0A0G2JEM0 Rbms2-201ENSMUST00000092033 1481 ntAPPRIS P4 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trav3n-3A0A0G2JEM0 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Trav3n-3A0A0G2JEM0 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trav3n-3A0A0G2JEM0 Asap3-201ENSMUST00000047526 4225 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trav3n-3A0A0G2JEM0 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC10.24□□□□□ -0.77
Trav3n-3A0A0G2JEM0 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trav3n-3A0A0G2JEM0 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC10.24□□□□□ -0.77
Trav3n-3A0A0G2JEM0 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC10.24□□□□□ -0.77
Trav3n-3A0A0G2JEM0 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC10.24□□□□□ -0.77
Trav3n-3A0A0G2JEM0 Tmem41b-202ENSMUST00000118429 2774 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trav3n-3A0A0G2JEM0 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Trav3n-3A0A0G2JEM0 CT573086.2-201ENSMUST00000227277 4992 ntBASIC10.24□□□□□ -0.77
Trav3n-3A0A0G2JEM0 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms