Protein–RNA interactions for Protein: A0A075B620

Trav7n-4, T cell receptor alpha variable 7N-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7n-4A0A075B620 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC10.23□□□□□ -0.77
Trav7n-4A0A075B620 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav7n-4A0A075B620 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav7n-4A0A075B620 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC10.23□□□□□ -0.77
Trav7n-4A0A075B620 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Trav7n-4A0A075B620 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC10.23□□□□□ -0.77
Trav7n-4A0A075B620 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Trav7n-4A0A075B620 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC10.22□□□□□ -0.77
Trav7n-4A0A075B620 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav7n-4A0A075B620 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC10.22□□□□□ -0.77
Trav7n-4A0A075B620 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Trav7n-4A0A075B620 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav7n-4A0A075B620 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC10.22□□□□□ -0.77
Trav7n-4A0A075B620 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Trav7n-4A0A075B620 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Trav7n-4A0A075B620 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav7n-4A0A075B620 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav7n-4A0A075B620 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Trav7n-4A0A075B620 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav7n-4A0A075B620 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav7n-4A0A075B620 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav7n-4A0A075B620 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC10.22□□□□□ -0.77
Trav7n-4A0A075B620 Pcnx2-201ENSMUST00000047239 7236 ntAPPRIS P1 TSL 5 BASIC10.22□□□□□ -0.77
Trav7n-4A0A075B620 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav7n-4A0A075B620 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Trav7n-4A0A075B620 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC10.22□□□□□ -0.77
Trav7n-4A0A075B620 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC10.22□□□□□ -0.77
Trav7n-4A0A075B620 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav7n-4A0A075B620 Mir874-201ENSMUST00000104769 76 ntBASIC10.22□□□□□ -0.77
Trav7n-4A0A075B620 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC10.22□□□□□ -0.77
Trav7n-4A0A075B620 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC10.22□□□□□ -0.77
Trav7n-4A0A075B620 Gm15483-201ENSMUST00000120338 456 ntBASIC10.22□□□□□ -0.77
Trav7n-4A0A075B620 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav7n-4A0A075B620 Gm7284-201ENSMUST00000131667 944 ntBASIC10.22□□□□□ -0.77
Trav7n-4A0A075B620 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC10.22□□□□□ -0.77
Trav7n-4A0A075B620 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC10.22□□□□□ -0.77
Trav7n-4A0A075B620 Gm7230-201ENSMUST00000173026 815 ntBASIC10.22□□□□□ -0.77
Trav7n-4A0A075B620 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC10.22□□□□□ -0.77
Trav7n-4A0A075B620 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC10.22□□□□□ -0.77
Trav7n-4A0A075B620 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC10.22□□□□□ -0.77
Trav7n-4A0A075B620 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC10.22□□□□□ -0.77
Trav7n-4A0A075B620 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC10.22□□□□□ -0.77
Trav7n-4A0A075B620 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC10.22□□□□□ -0.77
Trav7n-4A0A075B620 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC10.22□□□□□ -0.77
Trav7n-4A0A075B620 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Trav7n-4A0A075B620 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC10.22□□□□□ -0.77
Trav7n-4A0A075B620 AC149294.4-201ENSMUST00000227870 882 ntBASIC10.22□□□□□ -0.77
Trav7n-4A0A075B620 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC10.22□□□□□ -0.77
Trav7n-4A0A075B620 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav7n-4A0A075B620 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav7n-4A0A075B620 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC10.22□□□□□ -0.77
Trav7n-4A0A075B620 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav7n-4A0A075B620 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav7n-4A0A075B620 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC10.22□□□□□ -0.77
Trav7n-4A0A075B620 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Trav7n-4A0A075B620 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Trav7n-4A0A075B620 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Trav7n-4A0A075B620 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Trav7n-4A0A075B620 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC10.22□□□□□ -0.77
Trav7n-4A0A075B620 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Trav7n-4A0A075B620 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav7n-4A0A075B620 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Trav7n-4A0A075B620 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Trav7n-4A0A075B620 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Trav7n-4A0A075B620 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Trav7n-4A0A075B620 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC10.21□□□□□ -0.77
Trav7n-4A0A075B620 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC10.21□□□□□ -0.77
Trav7n-4A0A075B620 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Trav7n-4A0A075B620 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Trav7n-4A0A075B620 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Trav7n-4A0A075B620 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC10.21□□□□□ -0.77
Trav7n-4A0A075B620 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Trav7n-4A0A075B620 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.77
Trav7n-4A0A075B620 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.77
Trav7n-4A0A075B620 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Trav7n-4A0A075B620 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC10.21□□□□□ -0.77
Trav7n-4A0A075B620 Matn2-203ENSMUST00000226766 3252 ntBASIC10.21□□□□□ -0.77
Trav7n-4A0A075B620 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC10.21□□□□□ -0.77
Trav7n-4A0A075B620 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC10.21□□□□□ -0.77
Trav7n-4A0A075B620 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC10.21□□□□□ -0.77
Trav7n-4A0A075B620 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Trav7n-4A0A075B620 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC10.21□□□□□ -0.77
Trav7n-4A0A075B620 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Trav7n-4A0A075B620 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Trav7n-4A0A075B620 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC10.21□□□□□ -0.77
Trav7n-4A0A075B620 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.77
Trav7n-4A0A075B620 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Trav7n-4A0A075B620 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Trav7n-4A0A075B620 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Trav7n-4A0A075B620 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC10.21□□□□□ -0.77
Trav7n-4A0A075B620 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC10.21□□□□□ -0.78
Trav7n-4A0A075B620 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Trav7n-4A0A075B620 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.78
Trav7n-4A0A075B620 Stox2-209ENSMUST00000211882 9696 ntTSL 5 BASIC10.21□□□□□ -0.78
Trav7n-4A0A075B620 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Trav7n-4A0A075B620 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Trav7n-4A0A075B620 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC10.21□□□□□ -0.78
Trav7n-4A0A075B620 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
Trav7n-4A0A075B620 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.78
Trav7n-4A0A075B620 Gm6756-201ENSMUST00000180647 1620 ntBASIC10.21□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 36.2 ms