Protein–RNA interactions for Protein: S4R1G7

H2afb3, Histone H2A, mousemouse

Predictions only

Length 115 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb3S4R1G7 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC12.22□□□□□ -0.45
H2afb3S4R1G7 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
H2afb3S4R1G7 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC12.22□□□□□ -0.45
H2afb3S4R1G7 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
H2afb3S4R1G7 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
H2afb3S4R1G7 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
H2afb3S4R1G7 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
H2afb3S4R1G7 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
H2afb3S4R1G7 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC12.22□□□□□ -0.45
H2afb3S4R1G7 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC12.22□□□□□ -0.45
H2afb3S4R1G7 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
H2afb3S4R1G7 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
H2afb3S4R1G7 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
H2afb3S4R1G7 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC12.22□□□□□ -0.45
H2afb3S4R1G7 Gm21470-201ENSMUST00000187680 696 ntBASIC12.22□□□□□ -0.45
H2afb3S4R1G7 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
H2afb3S4R1G7 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC12.22□□□□□ -0.45
H2afb3S4R1G7 Gm9229-201ENSMUST00000222777 126 ntBASIC12.22□□□□□ -0.45
H2afb3S4R1G7 Chchd1-203ENSMUST00000224633 557 ntBASIC12.22□□□□□ -0.45
H2afb3S4R1G7 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
H2afb3S4R1G7 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
H2afb3S4R1G7 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
H2afb3S4R1G7 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
H2afb3S4R1G7 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
H2afb3S4R1G7 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
H2afb3S4R1G7 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
H2afb3S4R1G7 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
H2afb3S4R1G7 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
H2afb3S4R1G7 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
H2afb3S4R1G7 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
H2afb3S4R1G7 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
H2afb3S4R1G7 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
H2afb3S4R1G7 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
H2afb3S4R1G7 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
H2afb3S4R1G7 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
H2afb3S4R1G7 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
H2afb3S4R1G7 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
H2afb3S4R1G7 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC12.21□□□□□ -0.45
H2afb3S4R1G7 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
H2afb3S4R1G7 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC12.21□□□□□ -0.45
H2afb3S4R1G7 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
H2afb3S4R1G7 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
H2afb3S4R1G7 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
H2afb3S4R1G7 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC12.21□□□□□ -0.45
H2afb3S4R1G7 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.45
H2afb3S4R1G7 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
H2afb3S4R1G7 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC12.21□□□□□ -0.45
H2afb3S4R1G7 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
H2afb3S4R1G7 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC12.21□□□□□ -0.45
H2afb3S4R1G7 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
H2afb3S4R1G7 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
H2afb3S4R1G7 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
H2afb3S4R1G7 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
H2afb3S4R1G7 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
H2afb3S4R1G7 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
H2afb3S4R1G7 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC12.21□□□□□ -0.45
H2afb3S4R1G7 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
H2afb3S4R1G7 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
H2afb3S4R1G7 Gm4804-201ENSMUST00000182234 999 ntBASIC12.21□□□□□ -0.45
H2afb3S4R1G7 Gm28630-201ENSMUST00000187806 498 ntBASIC12.21□□□□□ -0.45
H2afb3S4R1G7 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
H2afb3S4R1G7 AC151286.1-201ENSMUST00000198489 145 ntBASIC12.21□□□□□ -0.45
H2afb3S4R1G7 AC153872.1-201ENSMUST00000199539 128 ntBASIC12.21□□□□□ -0.45
H2afb3S4R1G7 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC12.21□□□□□ -0.45
H2afb3S4R1G7 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC12.21□□□□□ -0.45
H2afb3S4R1G7 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
H2afb3S4R1G7 Gm18041-201ENSMUST00000218210 618 ntBASIC12.21□□□□□ -0.45
H2afb3S4R1G7 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
H2afb3S4R1G7 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
H2afb3S4R1G7 Mir497b-201ENSMUST00000093601 125 ntBASIC12.21□□□□□ -0.45
H2afb3S4R1G7 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC12.21□□□□□ -0.45
H2afb3S4R1G7 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
H2afb3S4R1G7 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
H2afb3S4R1G7 Gm45638-201ENSMUST00000211507 2878 ntBASIC12.21□□□□□ -0.45
H2afb3S4R1G7 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
H2afb3S4R1G7 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
H2afb3S4R1G7 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
H2afb3S4R1G7 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC12.21□□□□□ -0.46
H2afb3S4R1G7 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
H2afb3S4R1G7 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
H2afb3S4R1G7 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
H2afb3S4R1G7 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.46
H2afb3S4R1G7 Gypa-201ENSMUST00000063359 1848 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
H2afb3S4R1G7 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
H2afb3S4R1G7 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
H2afb3S4R1G7 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
H2afb3S4R1G7 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC12.2□□□□□ -0.46
H2afb3S4R1G7 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
H2afb3S4R1G7 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
H2afb3S4R1G7 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
H2afb3S4R1G7 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
H2afb3S4R1G7 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
H2afb3S4R1G7 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
H2afb3S4R1G7 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
H2afb3S4R1G7 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
H2afb3S4R1G7 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
H2afb3S4R1G7 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC12.2□□□□□ -0.46
H2afb3S4R1G7 Gm44065-201ENSMUST00000203184 3527 ntBASIC12.2□□□□□ -0.46
H2afb3S4R1G7 Gm15693-201ENSMUST00000120470 637 ntBASIC12.2□□□□□ -0.46
H2afb3S4R1G7 Gm15393-201ENSMUST00000120499 219 ntBASIC12.2□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms