Protein–RNA interactions for Protein: Q9Z0H3

Smarcb1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1, mousemouse

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcb1Q9Z0H3 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC14.04□□□□□ -0.16
Smarcb1Q9Z0H3 Gm29705-201ENSMUST00000212598 474 ntBASIC14.04□□□□□ -0.16
Smarcb1Q9Z0H3 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC14.04□□□□□ -0.16
Smarcb1Q9Z0H3 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Smarcb1Q9Z0H3 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Smarcb1Q9Z0H3 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Smarcb1Q9Z0H3 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Smarcb1Q9Z0H3 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC14.04□□□□□ -0.16
Smarcb1Q9Z0H3 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Smarcb1Q9Z0H3 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Smarcb1Q9Z0H3 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC14.04□□□□□ -0.16
Smarcb1Q9Z0H3 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Smarcb1Q9Z0H3 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Smarcb1Q9Z0H3 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Smarcb1Q9Z0H3 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Smarcb1Q9Z0H3 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Smarcb1Q9Z0H3 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC14.04□□□□□ -0.16
Smarcb1Q9Z0H3 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Smarcb1Q9Z0H3 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Smarcb1Q9Z0H3 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Smarcb1Q9Z0H3 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Smarcb1Q9Z0H3 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Smarcb1Q9Z0H3 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Smarcb1Q9Z0H3 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
Smarcb1Q9Z0H3 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
Smarcb1Q9Z0H3 AC167013.2-201ENSMUST00000228520 2684 ntBASIC14.03□□□□□ -0.16
Smarcb1Q9Z0H3 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Smarcb1Q9Z0H3 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC14.03□□□□□ -0.16
Smarcb1Q9Z0H3 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC14.03□□□□□ -0.16
Smarcb1Q9Z0H3 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Smarcb1Q9Z0H3 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Smarcb1Q9Z0H3 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC14.03□□□□□ -0.16
Smarcb1Q9Z0H3 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Smarcb1Q9Z0H3 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC14.03□□□□□ -0.16
Smarcb1Q9Z0H3 Gm4271-201ENSMUST00000174444 973 ntBASIC14.03□□□□□ -0.16
Smarcb1Q9Z0H3 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC14.03□□□□□ -0.16
Smarcb1Q9Z0H3 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Smarcb1Q9Z0H3 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC14.03□□□□□ -0.16
Smarcb1Q9Z0H3 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Smarcb1Q9Z0H3 Gm40466-201ENSMUST00000212174 422 ntBASIC14.03□□□□□ -0.16
Smarcb1Q9Z0H3 AC155237.1-201ENSMUST00000226196 1279 ntBASIC14.03□□□□□ -0.16
Smarcb1Q9Z0H3 AC126253.1-201ENSMUST00000227974 824 ntBASIC14.03□□□□□ -0.16
Smarcb1Q9Z0H3 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Smarcb1Q9Z0H3 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC14.03□□□□□ -0.16
Smarcb1Q9Z0H3 AC131068.2-201ENSMUST00000226175 1453 ntBASIC14.03□□□□□ -0.16
Smarcb1Q9Z0H3 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Smarcb1Q9Z0H3 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC14.03□□□□□ -0.16
Smarcb1Q9Z0H3 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Smarcb1Q9Z0H3 Gm10040-201ENSMUST00000080726 1662 ntBASIC14.03□□□□□ -0.16
Smarcb1Q9Z0H3 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Smarcb1Q9Z0H3 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC14.03□□□□□ -0.16
Smarcb1Q9Z0H3 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Smarcb1Q9Z0H3 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Smarcb1Q9Z0H3 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Smarcb1Q9Z0H3 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Smarcb1Q9Z0H3 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC14.03□□□□□ -0.16
Smarcb1Q9Z0H3 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC14.02□□□□□ -0.16
Smarcb1Q9Z0H3 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Smarcb1Q9Z0H3 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Smarcb1Q9Z0H3 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Smarcb1Q9Z0H3 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Smarcb1Q9Z0H3 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Smarcb1Q9Z0H3 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC14.02□□□□□ -0.16
Smarcb1Q9Z0H3 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Smarcb1Q9Z0H3 Gm37133-201ENSMUST00000192705 1922 ntBASIC14.02□□□□□ -0.16
Smarcb1Q9Z0H3 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Smarcb1Q9Z0H3 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC14.02□□□□□ -0.16
Smarcb1Q9Z0H3 AC096628.2-201ENSMUST00000225443 1413 ntBASIC14.02□□□□□ -0.16
Smarcb1Q9Z0H3 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC14.02□□□□□ -0.17
Smarcb1Q9Z0H3 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC14.02□□□□□ -0.17
Smarcb1Q9Z0H3 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Smarcb1Q9Z0H3 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC14.02□□□□□ -0.17
Smarcb1Q9Z0H3 Gm37922-201ENSMUST00000195596 455 ntBASIC14.02□□□□□ -0.17
Smarcb1Q9Z0H3 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Smarcb1Q9Z0H3 Gm42929-201ENSMUST00000198374 1286 ntBASIC14.02□□□□□ -0.17
Smarcb1Q9Z0H3 Gm43630-201ENSMUST00000201550 776 ntBASIC14.02□□□□□ -0.17
Smarcb1Q9Z0H3 AC125350.2-201ENSMUST00000224737 727 ntBASIC14.02□□□□□ -0.17
Smarcb1Q9Z0H3 AC122459.1-201ENSMUST00000228373 885 ntBASIC14.02□□□□□ -0.17
Smarcb1Q9Z0H3 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Smarcb1Q9Z0H3 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Smarcb1Q9Z0H3 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Smarcb1Q9Z0H3 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Smarcb1Q9Z0H3 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Smarcb1Q9Z0H3 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Smarcb1Q9Z0H3 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Smarcb1Q9Z0H3 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC14.02□□□□□ -0.17
Smarcb1Q9Z0H3 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Smarcb1Q9Z0H3 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Smarcb1Q9Z0H3 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Smarcb1Q9Z0H3 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Smarcb1Q9Z0H3 Abhd6-203ENSMUST00000225234 1958 ntBASIC14.02□□□□□ -0.17
Smarcb1Q9Z0H3 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC14.01□□□□□ -0.17
Smarcb1Q9Z0H3 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Smarcb1Q9Z0H3 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC14.01□□□□□ -0.17
Smarcb1Q9Z0H3 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Smarcb1Q9Z0H3 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Smarcb1Q9Z0H3 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC14.01□□□□□ -0.17
Smarcb1Q9Z0H3 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Smarcb1Q9Z0H3 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Smarcb1Q9Z0H3 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms