Protein–RNA interactions for Protein: Q9JM58

Crlf1, Cytokine receptor-like factor 1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Crlf1Q9JM58 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Crlf1Q9JM58 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC10.84□□□□□ -0.67
Crlf1Q9JM58 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC10.84□□□□□ -0.67
Crlf1Q9JM58 Gm5781-201ENSMUST00000219792 443 ntBASIC10.84□□□□□ -0.67
Crlf1Q9JM58 AC154680.1-201ENSMUST00000224376 859 ntBASIC10.84□□□□□ -0.67
Crlf1Q9JM58 Olfr667-201ENSMUST00000071362 981 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
Crlf1Q9JM58 Olfr666-201ENSMUST00000081116 957 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
Crlf1Q9JM58 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Crlf1Q9JM58 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Crlf1Q9JM58 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Crlf1Q9JM58 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Crlf1Q9JM58 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Crlf1Q9JM58 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Crlf1Q9JM58 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Crlf1Q9JM58 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Crlf1Q9JM58 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Crlf1Q9JM58 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Crlf1Q9JM58 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Crlf1Q9JM58 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Crlf1Q9JM58 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Crlf1Q9JM58 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Crlf1Q9JM58 Lexm-204ENSMUST00000189032 1549 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Crlf1Q9JM58 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Crlf1Q9JM58 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Crlf1Q9JM58 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Crlf1Q9JM58 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Crlf1Q9JM58 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Crlf1Q9JM58 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Crlf1Q9JM58 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Crlf1Q9JM58 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Crlf1Q9JM58 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Crlf1Q9JM58 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Crlf1Q9JM58 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC10.83□□□□□ -0.68
Crlf1Q9JM58 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Crlf1Q9JM58 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Crlf1Q9JM58 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Crlf1Q9JM58 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Crlf1Q9JM58 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Crlf1Q9JM58 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Crlf1Q9JM58 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Crlf1Q9JM58 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Crlf1Q9JM58 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Crlf1Q9JM58 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Crlf1Q9JM58 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Crlf1Q9JM58 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Crlf1Q9JM58 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Crlf1Q9JM58 Gm10434-201ENSMUST00000101158 471 ntBASIC10.83□□□□□ -0.68
Crlf1Q9JM58 Pmp22-203ENSMUST00000108701 723 ntAPPRIS P1 TSL 3 BASIC10.83□□□□□ -0.68
Crlf1Q9JM58 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC10.83□□□□□ -0.68
Crlf1Q9JM58 Gm15770-201ENSMUST00000117498 584 ntBASIC10.83□□□□□ -0.68
Crlf1Q9JM58 Gm7857-201ENSMUST00000117957 358 ntBASIC10.83□□□□□ -0.68
Crlf1Q9JM58 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC10.83□□□□□ -0.68
Crlf1Q9JM58 Gm12217-201ENSMUST00000118858 696 ntBASIC10.83□□□□□ -0.68
Crlf1Q9JM58 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC10.83□□□□□ -0.68
Crlf1Q9JM58 Gm13587-201ENSMUST00000152645 366 ntTSL 5 BASIC10.83□□□□□ -0.68
Crlf1Q9JM58 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Crlf1Q9JM58 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Crlf1Q9JM58 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC10.83□□□□□ -0.68
Crlf1Q9JM58 Tnnt1-213ENSMUST00000178163 934 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Crlf1Q9JM58 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC10.83□□□□□ -0.68
Crlf1Q9JM58 Mir6927-201ENSMUST00000184494 71 ntBASIC10.83□□□□□ -0.68
Crlf1Q9JM58 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC10.83□□□□□ -0.68
Crlf1Q9JM58 Dmrt1i-203ENSMUST00000197311 718 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Crlf1Q9JM58 Gm9678-201ENSMUST00000198979 1149 ntBASIC10.83□□□□□ -0.68
Crlf1Q9JM58 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Crlf1Q9JM58 Gm13097-201ENSMUST00000210722 397 ntBASIC10.83□□□□□ -0.68
Crlf1Q9JM58 Gm33175-201ENSMUST00000211562 461 ntTSL 5 BASIC10.83□□□□□ -0.68
Crlf1Q9JM58 1700112L15Rik-201ENSMUST00000212067 510 ntBASIC10.83□□□□□ -0.68
Crlf1Q9JM58 AC131690.1-201ENSMUST00000218406 374 ntBASIC10.83□□□□□ -0.68
Crlf1Q9JM58 AC022775.2-201ENSMUST00000227885 646 ntBASIC10.83□□□□□ -0.68
Crlf1Q9JM58 Fam92b-201ENSMUST00000048786 1187 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Crlf1Q9JM58 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Crlf1Q9JM58 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Crlf1Q9JM58 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Crlf1Q9JM58 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC10.83□□□□□ -0.68
Crlf1Q9JM58 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Crlf1Q9JM58 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Crlf1Q9JM58 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC10.83□□□□□ -0.68
Crlf1Q9JM58 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Crlf1Q9JM58 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Crlf1Q9JM58 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Crlf1Q9JM58 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC10.83□□□□□ -0.68
Crlf1Q9JM58 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Crlf1Q9JM58 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Crlf1Q9JM58 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC10.83□□□□□ -0.68
Crlf1Q9JM58 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC10.83□□□□□ -0.68
Crlf1Q9JM58 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Crlf1Q9JM58 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Crlf1Q9JM58 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Crlf1Q9JM58 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Crlf1Q9JM58 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Crlf1Q9JM58 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Crlf1Q9JM58 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Crlf1Q9JM58 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Crlf1Q9JM58 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC10.82□□□□□ -0.68
Crlf1Q9JM58 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Crlf1Q9JM58 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Crlf1Q9JM58 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Crlf1Q9JM58 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Crlf1Q9JM58 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 43.6 ms