Protein–RNA interactions for Protein: Q9EQM3

Nkx2-4, Homeobox protein Nkx-2.4, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-4Q9EQM3 Tpm1-210ENSMUST00000113693 1054 ntTSL 5 BASIC13.85□□□□□ -0.19
Nkx2-4Q9EQM3 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC13.85□□□□□ -0.19
Nkx2-4Q9EQM3 Gm24548-201ENSMUST00000158650 108 ntBASIC13.85□□□□□ -0.19
Nkx2-4Q9EQM3 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC13.85□□□□□ -0.19
Nkx2-4Q9EQM3 Rps13-201ENSMUST00000170953 589 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nkx2-4Q9EQM3 Gm37042-201ENSMUST00000193816 581 ntBASIC13.85□□□□□ -0.19
Nkx2-4Q9EQM3 AU022133-201ENSMUST00000200601 873 ntBASIC13.85□□□□□ -0.19
Nkx2-4Q9EQM3 1700112L15Rik-201ENSMUST00000212067 510 ntBASIC13.85□□□□□ -0.19
Nkx2-4Q9EQM3 Blvrb-201ENSMUST00000037399 1028 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nkx2-4Q9EQM3 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nkx2-4Q9EQM3 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC13.85□□□□□ -0.19
Nkx2-4Q9EQM3 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Nkx2-4Q9EQM3 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC13.85□□□□□ -0.19
Nkx2-4Q9EQM3 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nkx2-4Q9EQM3 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nkx2-4Q9EQM3 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nkx2-4Q9EQM3 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nkx2-4Q9EQM3 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Nkx2-4Q9EQM3 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nkx2-4Q9EQM3 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC13.85□□□□□ -0.19
Nkx2-4Q9EQM3 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Nkx2-4Q9EQM3 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nkx2-4Q9EQM3 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nkx2-4Q9EQM3 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Nkx2-4Q9EQM3 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nkx2-4Q9EQM3 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Nkx2-4Q9EQM3 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nkx2-4Q9EQM3 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nkx2-4Q9EQM3 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nkx2-4Q9EQM3 Bnip3l-ps-201ENSMUST00000101577 657 ntBASIC13.84□□□□□ -0.19
Nkx2-4Q9EQM3 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nkx2-4Q9EQM3 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nkx2-4Q9EQM3 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nkx2-4Q9EQM3 Snx29-202ENSMUST00000115814 1125 ntTSL 5 BASIC13.84□□□□□ -0.19
Nkx2-4Q9EQM3 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nkx2-4Q9EQM3 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC13.84□□□□□ -0.19
Nkx2-4Q9EQM3 Arf4os-201ENSMUST00000166902 566 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Nkx2-4Q9EQM3 Gm26956-201ENSMUST00000182176 986 ntBASIC13.84□□□□□ -0.19
Nkx2-4Q9EQM3 Mir7032-201ENSMUST00000185154 79 ntBASIC13.84□□□□□ -0.19
Nkx2-4Q9EQM3 Gm8176-201ENSMUST00000191297 1099 ntBASIC13.84□□□□□ -0.19
Nkx2-4Q9EQM3 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC13.84□□□□□ -0.19
Nkx2-4Q9EQM3 Gm44967-201ENSMUST00000207047 631 ntBASIC13.84□□□□□ -0.19
Nkx2-4Q9EQM3 Bnip3l-ps-202ENSMUST00000220709 1132 ntBASIC13.84□□□□□ -0.19
Nkx2-4Q9EQM3 Gm18615-201ENSMUST00000222919 1031 ntBASIC13.84□□□□□ -0.19
Nkx2-4Q9EQM3 Prorsd1-201ENSMUST00000039900 918 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nkx2-4Q9EQM3 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nkx2-4Q9EQM3 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC13.84□□□□□ -0.19
Nkx2-4Q9EQM3 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Nkx2-4Q9EQM3 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nkx2-4Q9EQM3 Gm15897-201ENSMUST00000117770 1486 ntBASIC13.84□□□□□ -0.19
Nkx2-4Q9EQM3 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nkx2-4Q9EQM3 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Nkx2-4Q9EQM3 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nkx2-4Q9EQM3 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nkx2-4Q9EQM3 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nkx2-4Q9EQM3 Ap5m1-205ENSMUST00000227431 3757 ntBASIC13.84□□□□□ -0.19
Nkx2-4Q9EQM3 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Nkx2-4Q9EQM3 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nkx2-4Q9EQM3 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nkx2-4Q9EQM3 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Nkx2-4Q9EQM3 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Nkx2-4Q9EQM3 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nkx2-4Q9EQM3 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.19
Nkx2-4Q9EQM3 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Nkx2-4Q9EQM3 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Nkx2-4Q9EQM3 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Nkx2-4Q9EQM3 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Nkx2-4Q9EQM3 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Nkx2-4Q9EQM3 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Nkx2-4Q9EQM3 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Nkx2-4Q9EQM3 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Nkx2-4Q9EQM3 AC148324.1-201ENSMUST00000219034 4240 ntBASIC13.83□□□□□ -0.2
Nkx2-4Q9EQM3 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Nkx2-4Q9EQM3 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Nkx2-4Q9EQM3 Pla2g1b-202ENSMUST00000112071 361 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Nkx2-4Q9EQM3 1700084C06Rik-201ENSMUST00000135674 750 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Nkx2-4Q9EQM3 Gm13316-201ENSMUST00000140537 691 ntBASIC13.83□□□□□ -0.2
Nkx2-4Q9EQM3 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Nkx2-4Q9EQM3 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Nkx2-4Q9EQM3 Gm8738-201ENSMUST00000172606 329 ntBASIC13.83□□□□□ -0.2
Nkx2-4Q9EQM3 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Nkx2-4Q9EQM3 Gm42800-201ENSMUST00000202494 733 ntTSL 5 BASIC13.83□□□□□ -0.2
Nkx2-4Q9EQM3 Gm4768-201ENSMUST00000206199 686 ntBASIC13.83□□□□□ -0.2
Nkx2-4Q9EQM3 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC13.83□□□□□ -0.2
Nkx2-4Q9EQM3 Gm8959-201ENSMUST00000213150 571 ntBASIC13.83□□□□□ -0.2
Nkx2-4Q9EQM3 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Nkx2-4Q9EQM3 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC13.83□□□□□ -0.2
Nkx2-4Q9EQM3 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Nkx2-4Q9EQM3 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC13.83□□□□□ -0.2
Nkx2-4Q9EQM3 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Nkx2-4Q9EQM3 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC13.83□□□□□ -0.2
Nkx2-4Q9EQM3 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nkx2-4Q9EQM3 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Nkx2-4Q9EQM3 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC13.82□□□□□ -0.2
Nkx2-4Q9EQM3 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nkx2-4Q9EQM3 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nkx2-4Q9EQM3 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nkx2-4Q9EQM3 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Nkx2-4Q9EQM3 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nkx2-4Q9EQM3 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 76.1 ms