Protein–RNA interactions for Protein: Q9DC33

Hmg20a, High mobility group protein 20A, mousemouse

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmg20aQ9DC33 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
Hmg20aQ9DC33 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Hmg20aQ9DC33 Flnc-202ENSMUST00000101617 8939 ntAPPRIS ALT1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Hmg20aQ9DC33 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Hmg20aQ9DC33 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Hmg20aQ9DC33 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Hmg20aQ9DC33 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Hmg20aQ9DC33 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC12.37□□□□□ -0.43
Hmg20aQ9DC33 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Hmg20aQ9DC33 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Hmg20aQ9DC33 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Hmg20aQ9DC33 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Hmg20aQ9DC33 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Hmg20aQ9DC33 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Hmg20aQ9DC33 Gm11452-201ENSMUST00000122376 690 ntBASIC12.37□□□□□ -0.43
Hmg20aQ9DC33 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Hmg20aQ9DC33 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Hmg20aQ9DC33 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Hmg20aQ9DC33 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
Hmg20aQ9DC33 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
Hmg20aQ9DC33 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Hmg20aQ9DC33 Ap1g2-201ENSMUST00000036041 2673 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Hmg20aQ9DC33 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Hmg20aQ9DC33 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Hmg20aQ9DC33 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Hmg20aQ9DC33 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC12.37□□□□□ -0.43
Hmg20aQ9DC33 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Hmg20aQ9DC33 Gm9109-201ENSMUST00000120254 1405 ntBASIC12.37□□□□□ -0.43
Hmg20aQ9DC33 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Hmg20aQ9DC33 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Hmg20aQ9DC33 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Hmg20aQ9DC33 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Hmg20aQ9DC33 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Hmg20aQ9DC33 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Hmg20aQ9DC33 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Hmg20aQ9DC33 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Hmg20aQ9DC33 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Hmg20aQ9DC33 AC025913.2-201ENSMUST00000220136 1766 ntBASIC12.36□□□□□ -0.43
Hmg20aQ9DC33 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Hmg20aQ9DC33 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC12.36□□□□□ -0.43
Hmg20aQ9DC33 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Hmg20aQ9DC33 Gm45643-201ENSMUST00000211364 1484 ntBASIC12.36□□□□□ -0.43
Hmg20aQ9DC33 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Hmg20aQ9DC33 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Hmg20aQ9DC33 Kremen1-201ENSMUST00000020662 4856 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Hmg20aQ9DC33 Glis3-209ENSMUST00000162022 7514 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Hmg20aQ9DC33 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC12.36□□□□□ -0.43
Hmg20aQ9DC33 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Hmg20aQ9DC33 Gm11764-201ENSMUST00000120221 623 ntBASIC12.36□□□□□ -0.43
Hmg20aQ9DC33 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Hmg20aQ9DC33 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC12.36□□□□□ -0.43
Hmg20aQ9DC33 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Hmg20aQ9DC33 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC12.36□□□□□ -0.43
Hmg20aQ9DC33 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Hmg20aQ9DC33 Pcdh15-238ENSMUST00000193739 5034 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Hmg20aQ9DC33 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Hmg20aQ9DC33 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Hmg20aQ9DC33 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Hmg20aQ9DC33 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Hmg20aQ9DC33 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Hmg20aQ9DC33 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Hmg20aQ9DC33 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Hmg20aQ9DC33 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Hmg20aQ9DC33 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Hmg20aQ9DC33 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Hmg20aQ9DC33 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Hmg20aQ9DC33 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Hmg20aQ9DC33 CT573086.2-201ENSMUST00000227277 4992 ntBASIC12.36□□□□□ -0.43
Hmg20aQ9DC33 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Hmg20aQ9DC33 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Hmg20aQ9DC33 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Hmg20aQ9DC33 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Hmg20aQ9DC33 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Hmg20aQ9DC33 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Hmg20aQ9DC33 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Hmg20aQ9DC33 Cbln3-201ENSMUST00000063871 4866 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Hmg20aQ9DC33 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC12.35□□□□□ -0.43
Hmg20aQ9DC33 CT025624.1-201ENSMUST00000224007 2700 ntBASIC12.35□□□□□ -0.43
Hmg20aQ9DC33 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC12.35□□□□□ -0.43
Hmg20aQ9DC33 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC12.35□□□□□ -0.43
Hmg20aQ9DC33 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Hmg20aQ9DC33 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Hmg20aQ9DC33 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Hmg20aQ9DC33 Gm7862-201ENSMUST00000121461 292 ntBASIC12.35□□□□□ -0.43
Hmg20aQ9DC33 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Hmg20aQ9DC33 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC12.35□□□□□ -0.43
Hmg20aQ9DC33 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC12.35□□□□□ -0.43
Hmg20aQ9DC33 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Hmg20aQ9DC33 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC12.35□□□□□ -0.43
Hmg20aQ9DC33 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Hmg20aQ9DC33 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC12.35□□□□□ -0.43
Hmg20aQ9DC33 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Hmg20aQ9DC33 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Hmg20aQ9DC33 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Hmg20aQ9DC33 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Hmg20aQ9DC33 Gm9347-201ENSMUST00000211473 1607 ntBASIC12.35□□□□□ -0.43
Hmg20aQ9DC33 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Hmg20aQ9DC33 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Hmg20aQ9DC33 Rbp3-201ENSMUST00000035695 5295 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Hmg20aQ9DC33 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms