Protein–RNA interactions for Protein: Q9DB34

Chmp2a, Charged multivesicular body protein 2a, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2aQ9DB34 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Chmp2aQ9DB34 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Chmp2aQ9DB34 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Chmp2aQ9DB34 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Chmp2aQ9DB34 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Chmp2aQ9DB34 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Chmp2aQ9DB34 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC14.16□□□□□ -0.14
Chmp2aQ9DB34 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Chmp2aQ9DB34 Gm7063-201ENSMUST00000186840 981 ntBASIC14.16□□□□□ -0.14
Chmp2aQ9DB34 Gm28631-201ENSMUST00000190740 334 ntBASIC14.16□□□□□ -0.14
Chmp2aQ9DB34 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC14.16□□□□□ -0.14
Chmp2aQ9DB34 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC14.16□□□□□ -0.14
Chmp2aQ9DB34 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Chmp2aQ9DB34 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Chmp2aQ9DB34 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Chmp2aQ9DB34 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Chmp2aQ9DB34 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Chmp2aQ9DB34 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Chmp2aQ9DB34 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC14.16□□□□□ -0.14
Chmp2aQ9DB34 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC14.16□□□□□ -0.14
Chmp2aQ9DB34 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Chmp2aQ9DB34 Gm13859-201ENSMUST00000119936 1423 ntBASIC14.15□□□□□ -0.14
Chmp2aQ9DB34 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Chmp2aQ9DB34 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Chmp2aQ9DB34 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC14.15□□□□□ -0.14
Chmp2aQ9DB34 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Chmp2aQ9DB34 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Chmp2aQ9DB34 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Chmp2aQ9DB34 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Chmp2aQ9DB34 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Chmp2aQ9DB34 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Chmp2aQ9DB34 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Chmp2aQ9DB34 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Chmp2aQ9DB34 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Chmp2aQ9DB34 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Chmp2aQ9DB34 Gm14730-201ENSMUST00000122378 1045 ntBASIC14.15□□□□□ -0.14
Chmp2aQ9DB34 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC14.15□□□□□ -0.14
Chmp2aQ9DB34 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Chmp2aQ9DB34 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Chmp2aQ9DB34 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Chmp2aQ9DB34 Gm7498-201ENSMUST00000203282 1084 ntBASIC14.15□□□□□ -0.14
Chmp2aQ9DB34 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Chmp2aQ9DB34 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Chmp2aQ9DB34 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Chmp2aQ9DB34 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Chmp2aQ9DB34 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Chmp2aQ9DB34 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Chmp2aQ9DB34 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Chmp2aQ9DB34 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Chmp2aQ9DB34 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Chmp2aQ9DB34 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Chmp2aQ9DB34 Gm37912-201ENSMUST00000191895 3076 ntBASIC14.15□□□□□ -0.14
Chmp2aQ9DB34 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Chmp2aQ9DB34 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Chmp2aQ9DB34 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC14.15□□□□□ -0.14
Chmp2aQ9DB34 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Chmp2aQ9DB34 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Chmp2aQ9DB34 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Chmp2aQ9DB34 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Chmp2aQ9DB34 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Chmp2aQ9DB34 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Chmp2aQ9DB34 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Chmp2aQ9DB34 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Chmp2aQ9DB34 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Chmp2aQ9DB34 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Chmp2aQ9DB34 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Chmp2aQ9DB34 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Chmp2aQ9DB34 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC14.14□□□□□ -0.15
Chmp2aQ9DB34 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Chmp2aQ9DB34 Ldha-ps-201ENSMUST00000119390 995 ntBASIC14.14□□□□□ -0.15
Chmp2aQ9DB34 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC14.14□□□□□ -0.15
Chmp2aQ9DB34 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Chmp2aQ9DB34 Gm43094-201ENSMUST00000196549 921 ntBASIC14.14□□□□□ -0.15
Chmp2aQ9DB34 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Chmp2aQ9DB34 Gm18934-201ENSMUST00000216671 1044 ntBASIC14.14□□□□□ -0.15
Chmp2aQ9DB34 AC131997.1-201ENSMUST00000228611 1229 ntBASIC14.14□□□□□ -0.15
Chmp2aQ9DB34 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Chmp2aQ9DB34 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC14.14□□□□□ -0.15
Chmp2aQ9DB34 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Chmp2aQ9DB34 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Chmp2aQ9DB34 Gm20632-201ENSMUST00000176760 2427 ntBASIC14.14□□□□□ -0.15
Chmp2aQ9DB34 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Chmp2aQ9DB34 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Chmp2aQ9DB34 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Chmp2aQ9DB34 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Chmp2aQ9DB34 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Chmp2aQ9DB34 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Chmp2aQ9DB34 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Chmp2aQ9DB34 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Chmp2aQ9DB34 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Chmp2aQ9DB34 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Chmp2aQ9DB34 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Chmp2aQ9DB34 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Chmp2aQ9DB34 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Chmp2aQ9DB34 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Chmp2aQ9DB34 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Chmp2aQ9DB34 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Chmp2aQ9DB34 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Chmp2aQ9DB34 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Chmp2aQ9DB34 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC14.13□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms