Protein–RNA interactions for Protein: Q9D3E6

Stag1, Cohesin subunit SA-1, mousemouse

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stag1Q9D3E6 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Stag1Q9D3E6 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC16.12■□□□□ 0.17
Stag1Q9D3E6 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Stag1Q9D3E6 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Stag1Q9D3E6 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Stag1Q9D3E6 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Stag1Q9D3E6 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Stag1Q9D3E6 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Stag1Q9D3E6 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Stag1Q9D3E6 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Stag1Q9D3E6 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Stag1Q9D3E6 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Stag1Q9D3E6 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Stag1Q9D3E6 Gm10040-201ENSMUST00000080726 1662 ntBASIC16.11■□□□□ 0.17
Stag1Q9D3E6 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Stag1Q9D3E6 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Stag1Q9D3E6 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Stag1Q9D3E6 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC16.11■□□□□ 0.17
Stag1Q9D3E6 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Stag1Q9D3E6 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC16.11■□□□□ 0.17
Stag1Q9D3E6 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Stag1Q9D3E6 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC16.11■□□□□ 0.17
Stag1Q9D3E6 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Stag1Q9D3E6 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC16.11■□□□□ 0.17
Stag1Q9D3E6 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC16.11■□□□□ 0.17
Stag1Q9D3E6 Gm1335-201ENSMUST00000121653 386 ntBASIC16.11■□□□□ 0.17
Stag1Q9D3E6 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC16.11■□□□□ 0.17
Stag1Q9D3E6 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC16.11■□□□□ 0.17
Stag1Q9D3E6 AC159896.2-201ENSMUST00000214753 269 ntBASIC16.11■□□□□ 0.17
Stag1Q9D3E6 AC154319.1-201ENSMUST00000216330 312 ntBASIC16.11■□□□□ 0.17
Stag1Q9D3E6 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Stag1Q9D3E6 AL589735.1-201ENSMUST00000224353 270 ntBASIC16.11■□□□□ 0.17
Stag1Q9D3E6 CT573086.1-201ENSMUST00000227202 1074 ntBASIC16.11■□□□□ 0.17
Stag1Q9D3E6 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Stag1Q9D3E6 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Stag1Q9D3E6 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Stag1Q9D3E6 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Stag1Q9D3E6 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Stag1Q9D3E6 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Stag1Q9D3E6 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Stag1Q9D3E6 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
Stag1Q9D3E6 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Stag1Q9D3E6 Gm42872-201ENSMUST00000200026 1967 ntBASIC16.11■□□□□ 0.17
Stag1Q9D3E6 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Stag1Q9D3E6 Gm42853-201ENSMUST00000201273 1387 ntBASIC16.11■□□□□ 0.17
Stag1Q9D3E6 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC16.11■□□□□ 0.17
Stag1Q9D3E6 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Stag1Q9D3E6 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Stag1Q9D3E6 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC16.11■□□□□ 0.17
Stag1Q9D3E6 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Stag1Q9D3E6 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Stag1Q9D3E6 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Stag1Q9D3E6 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Stag1Q9D3E6 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Stag1Q9D3E6 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Stag1Q9D3E6 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Stag1Q9D3E6 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Stag1Q9D3E6 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Stag1Q9D3E6 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC16.1■□□□□ 0.17
Stag1Q9D3E6 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Stag1Q9D3E6 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Stag1Q9D3E6 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Stag1Q9D3E6 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Stag1Q9D3E6 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Stag1Q9D3E6 Gm15198-201ENSMUST00000117283 177 ntBASIC16.1■□□□□ 0.17
Stag1Q9D3E6 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC16.1■□□□□ 0.17
Stag1Q9D3E6 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Stag1Q9D3E6 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC16.1■□□□□ 0.17
Stag1Q9D3E6 Gm27682-201ENSMUST00000183930 110 ntBASIC16.1■□□□□ 0.17
Stag1Q9D3E6 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC16.1■□□□□ 0.17
Stag1Q9D3E6 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Stag1Q9D3E6 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Stag1Q9D3E6 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Stag1Q9D3E6 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Stag1Q9D3E6 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Stag1Q9D3E6 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC16.1■□□□□ 0.17
Stag1Q9D3E6 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Stag1Q9D3E6 Gm12846-201ENSMUST00000120431 1373 ntBASIC16.1■□□□□ 0.17
Stag1Q9D3E6 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Stag1Q9D3E6 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC16.1■□□□□ 0.17
Stag1Q9D3E6 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Stag1Q9D3E6 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Stag1Q9D3E6 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC16.1■□□□□ 0.17
Stag1Q9D3E6 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Stag1Q9D3E6 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Stag1Q9D3E6 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC16.09■□□□□ 0.17
Stag1Q9D3E6 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Stag1Q9D3E6 Gm38042-201ENSMUST00000191614 5208 ntBASIC16.09■□□□□ 0.17
Stag1Q9D3E6 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Stag1Q9D3E6 Gm13369-201ENSMUST00000119442 987 ntBASIC16.09■□□□□ 0.17
Stag1Q9D3E6 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC16.09■□□□□ 0.17
Stag1Q9D3E6 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Stag1Q9D3E6 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC16.09■□□□□ 0.17
Stag1Q9D3E6 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC16.09■□□□□ 0.17
Stag1Q9D3E6 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Stag1Q9D3E6 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Stag1Q9D3E6 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Stag1Q9D3E6 Gm3695-201ENSMUST00000087222 1009 ntBASIC16.09■□□□□ 0.17
Stag1Q9D3E6 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Stag1Q9D3E6 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms