Protein–RNA interactions for Protein: Q9D0N7

Chaf1b, Chromatin assembly factor 1 subunit B, mousemouse

Predictions only

Length 572 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chaf1bQ9D0N7 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Chaf1bQ9D0N7 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Chaf1bQ9D0N7 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Chaf1bQ9D0N7 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC12.74□□□□□ -0.37
Chaf1bQ9D0N7 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Chaf1bQ9D0N7 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Chaf1bQ9D0N7 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Chaf1bQ9D0N7 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Chaf1bQ9D0N7 BC001981-202ENSMUST00000191393 1545 ntBASIC12.73□□□□□ -0.37
Chaf1bQ9D0N7 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Chaf1bQ9D0N7 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Chaf1bQ9D0N7 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Chaf1bQ9D0N7 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Chaf1bQ9D0N7 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Chaf1bQ9D0N7 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC12.73□□□□□ -0.37
Chaf1bQ9D0N7 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Chaf1bQ9D0N7 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Chaf1bQ9D0N7 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Chaf1bQ9D0N7 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Chaf1bQ9D0N7 Gm17271-201ENSMUST00000165535 355 ntBASIC12.73□□□□□ -0.37
Chaf1bQ9D0N7 Gm38225-201ENSMUST00000194001 393 ntBASIC12.73□□□□□ -0.37
Chaf1bQ9D0N7 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC12.73□□□□□ -0.37
Chaf1bQ9D0N7 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC12.73□□□□□ -0.37
Chaf1bQ9D0N7 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Chaf1bQ9D0N7 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Chaf1bQ9D0N7 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Chaf1bQ9D0N7 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Chaf1bQ9D0N7 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Chaf1bQ9D0N7 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Chaf1bQ9D0N7 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Chaf1bQ9D0N7 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Chaf1bQ9D0N7 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Chaf1bQ9D0N7 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Chaf1bQ9D0N7 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Chaf1bQ9D0N7 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Chaf1bQ9D0N7 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Chaf1bQ9D0N7 Gm45751-201ENSMUST00000210185 1573 ntBASIC12.73□□□□□ -0.37
Chaf1bQ9D0N7 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Chaf1bQ9D0N7 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Chaf1bQ9D0N7 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Chaf1bQ9D0N7 Ankra2-208ENSMUST00000226100 1476 ntBASIC12.72□□□□□ -0.37
Chaf1bQ9D0N7 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC12.72□□□□□ -0.37
Chaf1bQ9D0N7 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Chaf1bQ9D0N7 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Chaf1bQ9D0N7 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Chaf1bQ9D0N7 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Chaf1bQ9D0N7 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC12.72□□□□□ -0.37
Chaf1bQ9D0N7 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Chaf1bQ9D0N7 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Chaf1bQ9D0N7 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC12.72□□□□□ -0.37
Chaf1bQ9D0N7 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Chaf1bQ9D0N7 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Chaf1bQ9D0N7 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Chaf1bQ9D0N7 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Chaf1bQ9D0N7 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Chaf1bQ9D0N7 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC12.72□□□□□ -0.37
Chaf1bQ9D0N7 Gm10327-201ENSMUST00000105222 1002 ntBASIC12.72□□□□□ -0.37
Chaf1bQ9D0N7 Gm2810-201ENSMUST00000118681 990 ntBASIC12.72□□□□□ -0.37
Chaf1bQ9D0N7 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Chaf1bQ9D0N7 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC12.72□□□□□ -0.37
Chaf1bQ9D0N7 Gm9727-201ENSMUST00000161387 555 ntBASIC12.72□□□□□ -0.37
Chaf1bQ9D0N7 Gm18733-201ENSMUST00000173950 856 ntBASIC12.72□□□□□ -0.37
Chaf1bQ9D0N7 Gm5069-202ENSMUST00000192714 1011 ntBASIC12.72□□□□□ -0.37
Chaf1bQ9D0N7 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Chaf1bQ9D0N7 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC12.72□□□□□ -0.37
Chaf1bQ9D0N7 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Chaf1bQ9D0N7 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Chaf1bQ9D0N7 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC12.72□□□□□ -0.37
Chaf1bQ9D0N7 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC12.72□□□□□ -0.37
Chaf1bQ9D0N7 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC12.72□□□□□ -0.37
Chaf1bQ9D0N7 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Chaf1bQ9D0N7 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Chaf1bQ9D0N7 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Chaf1bQ9D0N7 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Chaf1bQ9D0N7 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Chaf1bQ9D0N7 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Chaf1bQ9D0N7 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Chaf1bQ9D0N7 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Chaf1bQ9D0N7 Gm44891-201ENSMUST00000208817 2223 ntBASIC12.72□□□□□ -0.37
Chaf1bQ9D0N7 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC12.72□□□□□ -0.37
Chaf1bQ9D0N7 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Chaf1bQ9D0N7 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC12.72□□□□□ -0.37
Chaf1bQ9D0N7 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Chaf1bQ9D0N7 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Chaf1bQ9D0N7 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Chaf1bQ9D0N7 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Chaf1bQ9D0N7 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Chaf1bQ9D0N7 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Chaf1bQ9D0N7 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Chaf1bQ9D0N7 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Chaf1bQ9D0N7 Gm42466-201ENSMUST00000202099 1301 ntBASIC12.71□□□□□ -0.37
Chaf1bQ9D0N7 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Chaf1bQ9D0N7 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC12.71□□□□□ -0.37
Chaf1bQ9D0N7 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC12.71□□□□□ -0.37
Chaf1bQ9D0N7 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Chaf1bQ9D0N7 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Chaf1bQ9D0N7 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC12.71□□□□□ -0.37
Chaf1bQ9D0N7 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC12.71□□□□□ -0.37
Chaf1bQ9D0N7 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC12.71□□□□□ -0.37
Chaf1bQ9D0N7 Gm12260-201ENSMUST00000122447 411 ntBASIC12.71□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 43.2 ms