Protein–RNA interactions for Protein: Q9CY50

Ssr1, Translocon-associated protein subunit alpha, mousemouse

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr1Q9CY50 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Ssr1Q9CY50 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Ssr1Q9CY50 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Ssr1Q9CY50 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC14.76□□□□□ -0.05
Ssr1Q9CY50 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC14.76□□□□□ -0.05
Ssr1Q9CY50 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ssr1Q9CY50 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC14.76□□□□□ -0.05
Ssr1Q9CY50 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ssr1Q9CY50 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Ssr1Q9CY50 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Ssr1Q9CY50 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ssr1Q9CY50 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ssr1Q9CY50 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ssr1Q9CY50 Pcnx2-201ENSMUST00000047239 7236 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Ssr1Q9CY50 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Ssr1Q9CY50 Gm32036-201ENSMUST00000221484 2638 ntTSL 2 BASIC14.76□□□□□ -0.05
Ssr1Q9CY50 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Ssr1Q9CY50 Gm8410-201ENSMUST00000117225 605 ntBASIC14.76□□□□□ -0.05
Ssr1Q9CY50 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Ssr1Q9CY50 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Ssr1Q9CY50 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC14.76□□□□□ -0.05
Ssr1Q9CY50 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC14.76□□□□□ -0.05
Ssr1Q9CY50 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Ssr1Q9CY50 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Ssr1Q9CY50 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ssr1Q9CY50 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC14.76□□□□□ -0.05
Ssr1Q9CY50 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Ssr1Q9CY50 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ssr1Q9CY50 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ssr1Q9CY50 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ssr1Q9CY50 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ssr1Q9CY50 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ssr1Q9CY50 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Ssr1Q9CY50 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ssr1Q9CY50 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Ssr1Q9CY50 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ssr1Q9CY50 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ssr1Q9CY50 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC14.75□□□□□ -0.05
Ssr1Q9CY50 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ssr1Q9CY50 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ssr1Q9CY50 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Ssr1Q9CY50 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Ssr1Q9CY50 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ssr1Q9CY50 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ssr1Q9CY50 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ssr1Q9CY50 Klhl14-201ENSMUST00000049105 4018 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ssr1Q9CY50 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Ssr1Q9CY50 Gm45667-201ENSMUST00000210380 1316 ntBASIC14.75□□□□□ -0.05
Ssr1Q9CY50 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC14.75□□□□□ -0.05
Ssr1Q9CY50 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ssr1Q9CY50 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ssr1Q9CY50 Gm5566-201ENSMUST00000116118 459 ntBASIC14.75□□□□□ -0.05
Ssr1Q9CY50 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC14.75□□□□□ -0.05
Ssr1Q9CY50 Gm29541-201ENSMUST00000191351 678 ntBASIC14.75□□□□□ -0.05
Ssr1Q9CY50 Gm7774-201ENSMUST00000200064 533 ntBASIC14.75□□□□□ -0.05
Ssr1Q9CY50 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Ssr1Q9CY50 Gm5779-201ENSMUST00000218467 910 ntBASIC14.75□□□□□ -0.05
Ssr1Q9CY50 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Ssr1Q9CY50 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ssr1Q9CY50 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ssr1Q9CY50 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Ssr1Q9CY50 Arhgef15-203ENSMUST00000108671 4372 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Ssr1Q9CY50 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ssr1Q9CY50 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Ssr1Q9CY50 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Ssr1Q9CY50 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ssr1Q9CY50 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ssr1Q9CY50 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Ssr1Q9CY50 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC14.75□□□□□ -0.05
Ssr1Q9CY50 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Ssr1Q9CY50 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC14.75□□□□□ -0.05
Ssr1Q9CY50 Gm43721-201ENSMUST00000199677 2313 ntBASIC14.75□□□□□ -0.05
Ssr1Q9CY50 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC14.75□□□□□ -0.05
Ssr1Q9CY50 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
Ssr1Q9CY50 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ssr1Q9CY50 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC14.74□□□□□ -0.05
Ssr1Q9CY50 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Ssr1Q9CY50 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC14.74□□□□□ -0.05
Ssr1Q9CY50 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC14.74□□□□□ -0.05
Ssr1Q9CY50 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Ssr1Q9CY50 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ssr1Q9CY50 Gm44414-201ENSMUST00000203660 2109 ntBASIC14.74□□□□□ -0.05
Ssr1Q9CY50 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
Ssr1Q9CY50 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ssr1Q9CY50 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
Ssr1Q9CY50 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ssr1Q9CY50 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ssr1Q9CY50 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ssr1Q9CY50 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC14.74□□□□□ -0.05
Ssr1Q9CY50 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ssr1Q9CY50 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC14.74□□□□□ -0.05
Ssr1Q9CY50 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Ssr1Q9CY50 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC14.74□□□□□ -0.05
Ssr1Q9CY50 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC14.74□□□□□ -0.05
Ssr1Q9CY50 Ighv1-25-201ENSMUST00000195638 345 ntBASIC14.74□□□□□ -0.05
Ssr1Q9CY50 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ssr1Q9CY50 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC14.74□□□□□ -0.05
Ssr1Q9CY50 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Ssr1Q9CY50 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ssr1Q9CY50 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC14.74□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 38.8 ms