Protein–RNA interactions for Protein: Q9CXK8

Nip7, 60S ribosome subunit biogenesis protein NIP7 homolog, mousemouse

Known RBP Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nip7Q9CXK8 n-R5s195-201ENSMUST00000082891 119 ntBASIC16.81■□□□□ 0.28
Nip7Q9CXK8 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Nip7Q9CXK8 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Nip7Q9CXK8 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Nip7Q9CXK8 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Nip7Q9CXK8 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Nip7Q9CXK8 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Nip7Q9CXK8 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC16.81■□□□□ 0.28
Nip7Q9CXK8 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Nip7Q9CXK8 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Nip7Q9CXK8 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Nip7Q9CXK8 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Nip7Q9CXK8 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Nip7Q9CXK8 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Nip7Q9CXK8 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Nip7Q9CXK8 Gm43697-201ENSMUST00000199637 2581 ntBASIC16.81■□□□□ 0.28
Nip7Q9CXK8 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Nip7Q9CXK8 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
Nip7Q9CXK8 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC16.8■□□□□ 0.28
Nip7Q9CXK8 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC16.8■□□□□ 0.28
Nip7Q9CXK8 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Nip7Q9CXK8 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Nip7Q9CXK8 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC16.8■□□□□ 0.28
Nip7Q9CXK8 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC16.8■□□□□ 0.28
Nip7Q9CXK8 Inca1-203ENSMUST00000108542 1080 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Nip7Q9CXK8 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Nip7Q9CXK8 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC16.8■□□□□ 0.28
Nip7Q9CXK8 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Nip7Q9CXK8 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Nip7Q9CXK8 Gm38158-201ENSMUST00000194617 339 ntBASIC16.8■□□□□ 0.28
Nip7Q9CXK8 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC16.8■□□□□ 0.28
Nip7Q9CXK8 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Nip7Q9CXK8 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Nip7Q9CXK8 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC16.8■□□□□ 0.28
Nip7Q9CXK8 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Nip7Q9CXK8 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Nip7Q9CXK8 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Nip7Q9CXK8 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Nip7Q9CXK8 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Nip7Q9CXK8 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Nip7Q9CXK8 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Nip7Q9CXK8 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Nip7Q9CXK8 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Nip7Q9CXK8 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC16.79■□□□□ 0.28
Nip7Q9CXK8 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC16.79■□□□□ 0.28
Nip7Q9CXK8 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Nip7Q9CXK8 Tmod4-202ENSMUST00000107227 1260 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Nip7Q9CXK8 Gm11591-201ENSMUST00000120063 702 ntBASIC16.79■□□□□ 0.28
Nip7Q9CXK8 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Nip7Q9CXK8 Gm7895-201ENSMUST00000187459 1173 ntBASIC16.79■□□□□ 0.28
Nip7Q9CXK8 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC16.79■□□□□ 0.28
Nip7Q9CXK8 AC159747.1-201ENSMUST00000219903 265 ntBASIC16.79■□□□□ 0.28
Nip7Q9CXK8 Gm8227-201ENSMUST00000223306 571 ntBASIC16.79■□□□□ 0.28
Nip7Q9CXK8 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC16.79■□□□□ 0.28
Nip7Q9CXK8 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Nip7Q9CXK8 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Nip7Q9CXK8 Gm43598-201ENSMUST00000202482 2479 ntBASIC16.79■□□□□ 0.28
Nip7Q9CXK8 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Nip7Q9CXK8 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Nip7Q9CXK8 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Nip7Q9CXK8 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Nip7Q9CXK8 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Nip7Q9CXK8 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Nip7Q9CXK8 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Nip7Q9CXK8 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Nip7Q9CXK8 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Nip7Q9CXK8 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Nip7Q9CXK8 Gm45133-201ENSMUST00000207548 2773 ntBASIC16.78■□□□□ 0.28
Nip7Q9CXK8 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC16.78■□□□□ 0.28
Nip7Q9CXK8 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Nip7Q9CXK8 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Nip7Q9CXK8 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Nip7Q9CXK8 Gm6023-201ENSMUST00000118217 606 ntBASIC16.78■□□□□ 0.28
Nip7Q9CXK8 Gm16479-201ENSMUST00000121706 932 ntBASIC16.78■□□□□ 0.28
Nip7Q9CXK8 Gm26083-201ENSMUST00000157904 193 ntBASIC16.78■□□□□ 0.28
Nip7Q9CXK8 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Nip7Q9CXK8 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Nip7Q9CXK8 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC16.78■□□□□ 0.28
Nip7Q9CXK8 Gm33474-201ENSMUST00000199486 1231 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Nip7Q9CXK8 CT485787.1-201ENSMUST00000225617 968 ntBASIC16.78■□□□□ 0.28
Nip7Q9CXK8 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Nip7Q9CXK8 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC16.78■□□□□ 0.28
Nip7Q9CXK8 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Nip7Q9CXK8 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Nip7Q9CXK8 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Nip7Q9CXK8 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Nip7Q9CXK8 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Nip7Q9CXK8 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC16.78■□□□□ 0.28
Nip7Q9CXK8 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Nip7Q9CXK8 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Nip7Q9CXK8 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Nip7Q9CXK8 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Nip7Q9CXK8 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Nip7Q9CXK8 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC16.78■□□□□ 0.28
Nip7Q9CXK8 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Nip7Q9CXK8 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Nip7Q9CXK8 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Nip7Q9CXK8 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Nip7Q9CXK8 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Nip7Q9CXK8 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 75.1 ms