Protein–RNA interactions for Protein: Q99MQ5

Col25a1, Collagen alpha-1(XXV) chain, mousemouse

Predictions only

Length 666 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col25a1Q99MQ5 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Col25a1Q99MQ5 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
Col25a1Q99MQ5 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Col25a1Q99MQ5 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Col25a1Q99MQ5 Gm15131-201ENSMUST00000119124 595 ntBASIC14.02□□□□□ -0.17
Col25a1Q99MQ5 Gm16172-201ENSMUST00000156224 682 ntTSL 3 BASIC14.02□□□□□ -0.17
Col25a1Q99MQ5 Gm26636-201ENSMUST00000181696 1115 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Col25a1Q99MQ5 Smim22-207ENSMUST00000184439 382 ntAPPRIS P3 TSL 2 BASIC14.02□□□□□ -0.17
Col25a1Q99MQ5 Gm28450-201ENSMUST00000187349 638 ntBASIC14.02□□□□□ -0.17
Col25a1Q99MQ5 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC14.02□□□□□ -0.17
Col25a1Q99MQ5 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Col25a1Q99MQ5 Gm44992-206ENSMUST00000209313 1261 ntTSL 5 BASIC14.02□□□□□ -0.17
Col25a1Q99MQ5 Gm7600-201ENSMUST00000209657 785 ntBASIC14.02□□□□□ -0.17
Col25a1Q99MQ5 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC14.02□□□□□ -0.17
Col25a1Q99MQ5 AC154176.1-201ENSMUST00000225897 220 ntBASIC14.02□□□□□ -0.17
Col25a1Q99MQ5 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Col25a1Q99MQ5 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Col25a1Q99MQ5 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC14.02□□□□□ -0.17
Col25a1Q99MQ5 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC14.02□□□□□ -0.17
Col25a1Q99MQ5 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Col25a1Q99MQ5 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Col25a1Q99MQ5 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Col25a1Q99MQ5 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Col25a1Q99MQ5 9030407P20Rik-201ENSMUST00000180933 2310 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Col25a1Q99MQ5 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Col25a1Q99MQ5 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Col25a1Q99MQ5 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Col25a1Q99MQ5 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Col25a1Q99MQ5 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC14.01□□□□□ -0.17
Col25a1Q99MQ5 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col25a1Q99MQ5 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col25a1Q99MQ5 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col25a1Q99MQ5 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Col25a1Q99MQ5 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Col25a1Q99MQ5 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Col25a1Q99MQ5 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC14.01□□□□□ -0.17
Col25a1Q99MQ5 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col25a1Q99MQ5 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col25a1Q99MQ5 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col25a1Q99MQ5 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col25a1Q99MQ5 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Col25a1Q99MQ5 Gm45546-201ENSMUST00000211053 2394 ntBASIC14.01□□□□□ -0.17
Col25a1Q99MQ5 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC14.01□□□□□ -0.17
Col25a1Q99MQ5 Rgs6-207ENSMUST00000186323 1308 ntTSL 5 BASIC14.01□□□□□ -0.17
Col25a1Q99MQ5 Sparc-209ENSMUST00000216313 1304 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Col25a1Q99MQ5 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col25a1Q99MQ5 Ccl27a-203ENSMUST00000108033 428 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col25a1Q99MQ5 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Col25a1Q99MQ5 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC14.01□□□□□ -0.17
Col25a1Q99MQ5 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
Col25a1Q99MQ5 1700099I09Rik-201ENSMUST00000167834 769 ntTSL 2 BASIC14.01□□□□□ -0.17
Col25a1Q99MQ5 Gm6222-202ENSMUST00000182143 629 ntBASIC14.01□□□□□ -0.17
Col25a1Q99MQ5 Gm17889-201ENSMUST00000198410 598 ntBASIC14.01□□□□□ -0.17
Col25a1Q99MQ5 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col25a1Q99MQ5 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Col25a1Q99MQ5 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col25a1Q99MQ5 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col25a1Q99MQ5 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col25a1Q99MQ5 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Col25a1Q99MQ5 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col25a1Q99MQ5 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col25a1Q99MQ5 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Col25a1Q99MQ5 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col25a1Q99MQ5 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col25a1Q99MQ5 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col25a1Q99MQ5 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Col25a1Q99MQ5 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC14□□□□□ -0.17
Col25a1Q99MQ5 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Col25a1Q99MQ5 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Col25a1Q99MQ5 Gm14451-201ENSMUST00000121581 1542 ntBASIC14□□□□□ -0.17
Col25a1Q99MQ5 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC14□□□□□ -0.17
Col25a1Q99MQ5 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Col25a1Q99MQ5 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Col25a1Q99MQ5 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Col25a1Q99MQ5 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Col25a1Q99MQ5 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Col25a1Q99MQ5 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Col25a1Q99MQ5 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC14□□□□□ -0.17
Col25a1Q99MQ5 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Col25a1Q99MQ5 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC14□□□□□ -0.17
Col25a1Q99MQ5 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Col25a1Q99MQ5 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Col25a1Q99MQ5 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Col25a1Q99MQ5 Cyb5d1-202ENSMUST00000108660 1034 ntTSL 5 BASIC14□□□□□ -0.17
Col25a1Q99MQ5 Gm12816-201ENSMUST00000118069 1212 ntBASIC14□□□□□ -0.17
Col25a1Q99MQ5 Gm13369-201ENSMUST00000119442 987 ntBASIC14□□□□□ -0.17
Col25a1Q99MQ5 Gm14208-201ENSMUST00000119645 678 ntBASIC14□□□□□ -0.17
Col25a1Q99MQ5 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC14□□□□□ -0.17
Col25a1Q99MQ5 Olfr668-201ENSMUST00000164391 957 ntAPPRIS P1 BASIC14□□□□□ -0.17
Col25a1Q99MQ5 Rps13-201ENSMUST00000170953 589 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Col25a1Q99MQ5 Cyb561-206ENSMUST00000184086 1130 ntTSL 5 BASIC14□□□□□ -0.17
Col25a1Q99MQ5 Gm9540-201ENSMUST00000188230 478 ntBASIC14□□□□□ -0.17
Col25a1Q99MQ5 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC14□□□□□ -0.17
Col25a1Q99MQ5 Gm38979-201ENSMUST00000207099 698 ntTSL 3 BASIC14□□□□□ -0.17
Col25a1Q99MQ5 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC14□□□□□ -0.17
Col25a1Q99MQ5 Olfr667-201ENSMUST00000071362 981 ntAPPRIS P1 BASIC14□□□□□ -0.17
Col25a1Q99MQ5 Ufc1-201ENSMUST00000080001 1007 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Col25a1Q99MQ5 Olfr666-201ENSMUST00000081116 957 ntAPPRIS P1 BASIC14□□□□□ -0.17
Col25a1Q99MQ5 Gm5879-201ENSMUST00000089501 1209 ntBASIC14□□□□□ -0.17
Col25a1Q99MQ5 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms