Protein–RNA interactions for Protein: Q91XZ6

Pcdhb4, Protocadherin beta 4, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb4Q91XZ6 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Pcdhb4Q91XZ6 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Pcdhb4Q91XZ6 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Pcdhb4Q91XZ6 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Pcdhb4Q91XZ6 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
Pcdhb4Q91XZ6 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Pcdhb4Q91XZ6 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Pcdhb4Q91XZ6 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Pcdhb4Q91XZ6 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Pcdhb4Q91XZ6 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Pcdhb4Q91XZ6 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Pcdhb4Q91XZ6 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Pcdhb4Q91XZ6 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC13.52□□□□□ -0.25
Pcdhb4Q91XZ6 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Pcdhb4Q91XZ6 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC13.51□□□□□ -0.25
Pcdhb4Q91XZ6 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdhb4Q91XZ6 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdhb4Q91XZ6 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdhb4Q91XZ6 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdhb4Q91XZ6 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdhb4Q91XZ6 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdhb4Q91XZ6 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdhb4Q91XZ6 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdhb4Q91XZ6 Gm9924-202ENSMUST00000192760 2311 ntBASIC13.51□□□□□ -0.25
Pcdhb4Q91XZ6 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdhb4Q91XZ6 Gm8337-201ENSMUST00000187358 1938 ntBASIC13.51□□□□□ -0.25
Pcdhb4Q91XZ6 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC13.51□□□□□ -0.25
Pcdhb4Q91XZ6 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Pcdhb4Q91XZ6 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdhb4Q91XZ6 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdhb4Q91XZ6 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdhb4Q91XZ6 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdhb4Q91XZ6 AC154767.3-201ENSMUST00000225150 1342 ntBASIC13.51□□□□□ -0.25
Pcdhb4Q91XZ6 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC13.51□□□□□ -0.25
Pcdhb4Q91XZ6 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdhb4Q91XZ6 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC13.51□□□□□ -0.25
Pcdhb4Q91XZ6 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC13.51□□□□□ -0.25
Pcdhb4Q91XZ6 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC13.51□□□□□ -0.25
Pcdhb4Q91XZ6 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC13.51□□□□□ -0.25
Pcdhb4Q91XZ6 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdhb4Q91XZ6 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Pcdhb4Q91XZ6 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC13.51□□□□□ -0.25
Pcdhb4Q91XZ6 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC13.51□□□□□ -0.25
Pcdhb4Q91XZ6 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Pcdhb4Q91XZ6 Gm37277-201ENSMUST00000194052 1111 ntBASIC13.51□□□□□ -0.25
Pcdhb4Q91XZ6 Gm46209-201ENSMUST00000217912 553 ntBASIC13.51□□□□□ -0.25
Pcdhb4Q91XZ6 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdhb4Q91XZ6 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdhb4Q91XZ6 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Pcdhb4Q91XZ6 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Pcdhb4Q91XZ6 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC13.51□□□□□ -0.25
Pcdhb4Q91XZ6 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Pcdhb4Q91XZ6 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Pcdhb4Q91XZ6 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdhb4Q91XZ6 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdhb4Q91XZ6 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC13.51□□□□□ -0.25
Pcdhb4Q91XZ6 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Pcdhb4Q91XZ6 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Pcdhb4Q91XZ6 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdhb4Q91XZ6 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdhb4Q91XZ6 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdhb4Q91XZ6 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdhb4Q91XZ6 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdhb4Q91XZ6 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdhb4Q91XZ6 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdhb4Q91XZ6 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdhb4Q91XZ6 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdhb4Q91XZ6 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdhb4Q91XZ6 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdhb4Q91XZ6 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdhb4Q91XZ6 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdhb4Q91XZ6 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdhb4Q91XZ6 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdhb4Q91XZ6 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdhb4Q91XZ6 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdhb4Q91XZ6 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdhb4Q91XZ6 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdhb4Q91XZ6 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Pcdhb4Q91XZ6 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdhb4Q91XZ6 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdhb4Q91XZ6 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdhb4Q91XZ6 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdhb4Q91XZ6 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC13.5□□□□□ -0.25
Pcdhb4Q91XZ6 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC13.5□□□□□ -0.25
Pcdhb4Q91XZ6 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Pcdhb4Q91XZ6 AC153872.1-201ENSMUST00000199539 128 ntBASIC13.5□□□□□ -0.25
Pcdhb4Q91XZ6 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC13.5□□□□□ -0.25
Pcdhb4Q91XZ6 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdhb4Q91XZ6 Gm9229-201ENSMUST00000222777 126 ntBASIC13.5□□□□□ -0.25
Pcdhb4Q91XZ6 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdhb4Q91XZ6 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdhb4Q91XZ6 Mir497b-201ENSMUST00000093601 125 ntBASIC13.5□□□□□ -0.25
Pcdhb4Q91XZ6 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC13.5□□□□□ -0.25
Pcdhb4Q91XZ6 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdhb4Q91XZ6 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Pcdhb4Q91XZ6 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdhb4Q91XZ6 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdhb4Q91XZ6 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdhb4Q91XZ6 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdhb4Q91XZ6 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 40.8 ms