Protein–RNA interactions for Protein: Q91V04

Tram1, Translocating chain-associated membrane protein 1, mousemouse

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tram1Q91V04 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC11.67□□□□□ -0.54
Tram1Q91V04 CT025555.1-201ENSMUST00000225901 1217 ntBASIC11.67□□□□□ -0.54
Tram1Q91V04 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Tram1Q91V04 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Tram1Q91V04 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC11.67□□□□□ -0.54
Tram1Q91V04 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC11.67□□□□□ -0.54
Tram1Q91V04 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Tram1Q91V04 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Tram1Q91V04 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Tram1Q91V04 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Tram1Q91V04 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Tram1Q91V04 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Tram1Q91V04 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Tram1Q91V04 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Tram1Q91V04 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Tram1Q91V04 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Tram1Q91V04 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Tram1Q91V04 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Tram1Q91V04 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Tram1Q91V04 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Tram1Q91V04 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Tram1Q91V04 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC11.66□□□□□ -0.54
Tram1Q91V04 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC11.66□□□□□ -0.54
Tram1Q91V04 Gm6443-201ENSMUST00000203599 874 ntBASIC11.66□□□□□ -0.54
Tram1Q91V04 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Tram1Q91V04 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Tram1Q91V04 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Tram1Q91V04 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Tram1Q91V04 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC11.66□□□□□ -0.54
Tram1Q91V04 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Tram1Q91V04 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC11.66□□□□□ -0.54
Tram1Q91V04 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Tram1Q91V04 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC11.66□□□□□ -0.54
Tram1Q91V04 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Tram1Q91V04 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Tram1Q91V04 AC139350.1-201ENSMUST00000227064 1594 ntBASIC11.66□□□□□ -0.54
Tram1Q91V04 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Tram1Q91V04 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Tram1Q91V04 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Tram1Q91V04 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Tram1Q91V04 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Tram1Q91V04 Flrt1-201ENSMUST00000113383 5859 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Tram1Q91V04 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Tram1Q91V04 Camta1-201ENSMUST00000049790 8423 ntAPPRIS P2 TSL 5 BASIC11.66□□□□□ -0.54
Tram1Q91V04 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Tram1Q91V04 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Tram1Q91V04 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC11.65□□□□□ -0.54
Tram1Q91V04 BC001981-202ENSMUST00000191393 1545 ntBASIC11.65□□□□□ -0.54
Tram1Q91V04 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Tram1Q91V04 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Tram1Q91V04 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
Tram1Q91V04 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Tram1Q91V04 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Tram1Q91V04 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Tram1Q91V04 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Tram1Q91V04 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Tram1Q91V04 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Tram1Q91V04 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC11.65□□□□□ -0.54
Tram1Q91V04 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
Tram1Q91V04 Gm9279-201ENSMUST00000223175 1606 ntBASIC11.65□□□□□ -0.54
Tram1Q91V04 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Tram1Q91V04 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Tram1Q91V04 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Tram1Q91V04 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Tram1Q91V04 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Tram1Q91V04 Vwa7-201ENSMUST00000007245 4313 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
Tram1Q91V04 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
Tram1Q91V04 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Tram1Q91V04 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Tram1Q91V04 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC11.65□□□□□ -0.54
Tram1Q91V04 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC11.65□□□□□ -0.54
Tram1Q91V04 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC11.65□□□□□ -0.54
Tram1Q91V04 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC11.65□□□□□ -0.54
Tram1Q91V04 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Tram1Q91V04 Gm34391-201ENSMUST00000203706 907 ntBASIC11.65□□□□□ -0.54
Tram1Q91V04 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Tram1Q91V04 AC166997.1-201ENSMUST00000225122 572 ntBASIC11.65□□□□□ -0.54
Tram1Q91V04 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Tram1Q91V04 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Tram1Q91V04 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Tram1Q91V04 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Tram1Q91V04 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
Tram1Q91V04 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC11.65□□□□□ -0.54
Tram1Q91V04 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Tram1Q91V04 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Tram1Q91V04 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Tram1Q91V04 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Tram1Q91V04 AC114543.1-201ENSMUST00000226451 1558 ntBASIC11.65□□□□□ -0.54
Tram1Q91V04 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Tram1Q91V04 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
Tram1Q91V04 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Tram1Q91V04 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
Tram1Q91V04 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC11.65□□□□□ -0.54
Tram1Q91V04 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Tram1Q91V04 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Tram1Q91V04 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.55
Tram1Q91V04 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Tram1Q91V04 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Tram1Q91V04 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC11.65□□□□□ -0.55
Tram1Q91V04 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms