Protein–RNA interactions for Protein: Q91UZ8

Pcdhb11, MCG141285, mousemouse

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb11Q91UZ8 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdhb11Q91UZ8 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdhb11Q91UZ8 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdhb11Q91UZ8 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdhb11Q91UZ8 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC13.89□□□□□ -0.19
Pcdhb11Q91UZ8 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdhb11Q91UZ8 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdhb11Q91UZ8 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdhb11Q91UZ8 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdhb11Q91UZ8 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC13.89□□□□□ -0.19
Pcdhb11Q91UZ8 Gm14752-201ENSMUST00000120719 2075 ntBASIC13.89□□□□□ -0.19
Pcdhb11Q91UZ8 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdhb11Q91UZ8 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdhb11Q91UZ8 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
Pcdhb11Q91UZ8 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdhb11Q91UZ8 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Pcdhb11Q91UZ8 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdhb11Q91UZ8 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdhb11Q91UZ8 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdhb11Q91UZ8 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdhb11Q91UZ8 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Pcdhb11Q91UZ8 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdhb11Q91UZ8 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdhb11Q91UZ8 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdhb11Q91UZ8 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdhb11Q91UZ8 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdhb11Q91UZ8 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdhb11Q91UZ8 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdhb11Q91UZ8 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdhb11Q91UZ8 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Pcdhb11Q91UZ8 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Pcdhb11Q91UZ8 Gm21038-201ENSMUST00000222205 1383 ntBASIC13.88□□□□□ -0.19
Pcdhb11Q91UZ8 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Pcdhb11Q91UZ8 Gm44291-201ENSMUST00000203102 2865 ntBASIC13.88□□□□□ -0.19
Pcdhb11Q91UZ8 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdhb11Q91UZ8 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdhb11Q91UZ8 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Pcdhb11Q91UZ8 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
Pcdhb11Q91UZ8 Gm12341-201ENSMUST00000119724 503 ntBASIC13.88□□□□□ -0.19
Pcdhb11Q91UZ8 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC13.88□□□□□ -0.19
Pcdhb11Q91UZ8 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdhb11Q91UZ8 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdhb11Q91UZ8 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdhb11Q91UZ8 Gm37917-201ENSMUST00000194711 392 ntBASIC13.88□□□□□ -0.19
Pcdhb11Q91UZ8 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdhb11Q91UZ8 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC13.88□□□□□ -0.19
Pcdhb11Q91UZ8 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC13.88□□□□□ -0.19
Pcdhb11Q91UZ8 Gm18624-201ENSMUST00000220966 658 ntBASIC13.88□□□□□ -0.19
Pcdhb11Q91UZ8 Gm17330-201ENSMUST00000221047 165 ntBASIC13.88□□□□□ -0.19
Pcdhb11Q91UZ8 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
Pcdhb11Q91UZ8 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdhb11Q91UZ8 Gm38391-201ENSMUST00000191720 4069 ntBASIC13.88□□□□□ -0.19
Pcdhb11Q91UZ8 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdhb11Q91UZ8 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdhb11Q91UZ8 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdhb11Q91UZ8 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdhb11Q91UZ8 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdhb11Q91UZ8 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdhb11Q91UZ8 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Pcdhb11Q91UZ8 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Pcdhb11Q91UZ8 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdhb11Q91UZ8 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdhb11Q91UZ8 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdhb11Q91UZ8 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
Pcdhb11Q91UZ8 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdhb11Q91UZ8 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC13.88□□□□□ -0.19
Pcdhb11Q91UZ8 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdhb11Q91UZ8 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC13.87□□□□□ -0.19
Pcdhb11Q91UZ8 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Pcdhb11Q91UZ8 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Pcdhb11Q91UZ8 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Pcdhb11Q91UZ8 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Pcdhb11Q91UZ8 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Pcdhb11Q91UZ8 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Pcdhb11Q91UZ8 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Pcdhb11Q91UZ8 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Pcdhb11Q91UZ8 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Pcdhb11Q91UZ8 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Pcdhb11Q91UZ8 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC13.87□□□□□ -0.19
Pcdhb11Q91UZ8 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC13.87□□□□□ -0.19
Pcdhb11Q91UZ8 Gm7558-201ENSMUST00000193221 1165 ntBASIC13.87□□□□□ -0.19
Pcdhb11Q91UZ8 AC238811.3-201ENSMUST00000225422 709 ntBASIC13.87□□□□□ -0.19
Pcdhb11Q91UZ8 Gm3695-201ENSMUST00000087222 1009 ntBASIC13.87□□□□□ -0.19
Pcdhb11Q91UZ8 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Pcdhb11Q91UZ8 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Pcdhb11Q91UZ8 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Pcdhb11Q91UZ8 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Pcdhb11Q91UZ8 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Pcdhb11Q91UZ8 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Pcdhb11Q91UZ8 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Pcdhb11Q91UZ8 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Pcdhb11Q91UZ8 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC13.87□□□□□ -0.19
Pcdhb11Q91UZ8 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Pcdhb11Q91UZ8 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
Pcdhb11Q91UZ8 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Pcdhb11Q91UZ8 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Pcdhb11Q91UZ8 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Pcdhb11Q91UZ8 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Pcdhb11Q91UZ8 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Pcdhb11Q91UZ8 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 68.9 ms