Protein–RNA interactions for Protein: Q8VIM6

Strc, Stereocilin, mousemouse

Predictions only

Length 1,809 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
StrcQ8VIM6 AC132901.1-201ENSMUST00000224345 508 ntBASIC15.71■□□□□ 0.11
StrcQ8VIM6 AC165260.3-202ENSMUST00000224550 1031 ntBASIC15.71■□□□□ 0.11
StrcQ8VIM6 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
StrcQ8VIM6 Olfr605-201ENSMUST00000080660 1011 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
StrcQ8VIM6 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
StrcQ8VIM6 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC15.71■□□□□ 0.11
StrcQ8VIM6 Gm13812-201ENSMUST00000118061 1347 ntBASIC15.71■□□□□ 0.11
StrcQ8VIM6 Gm13810-201ENSMUST00000118584 1347 ntBASIC15.71■□□□□ 0.11
StrcQ8VIM6 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
StrcQ8VIM6 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
StrcQ8VIM6 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
StrcQ8VIM6 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC15.71■□□□□ 0.11
StrcQ8VIM6 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
StrcQ8VIM6 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
StrcQ8VIM6 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
StrcQ8VIM6 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC15.71■□□□□ 0.1
StrcQ8VIM6 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
StrcQ8VIM6 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
StrcQ8VIM6 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
StrcQ8VIM6 Limd2-203ENSMUST00000106875 936 ntAPPRIS P1 TSL 3 BASIC15.71■□□□□ 0.1
StrcQ8VIM6 Gm14396-201ENSMUST00000126966 548 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
StrcQ8VIM6 Gm33222-201ENSMUST00000193725 654 ntTSL 3 BASIC15.71■□□□□ 0.1
StrcQ8VIM6 AC136986.1-201ENSMUST00000222829 380 ntTSL 2 BASIC15.71■□□□□ 0.1
StrcQ8VIM6 Sst-201ENSMUST00000004480 599 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
StrcQ8VIM6 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.1
StrcQ8VIM6 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
StrcQ8VIM6 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
StrcQ8VIM6 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
StrcQ8VIM6 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
StrcQ8VIM6 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
StrcQ8VIM6 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
StrcQ8VIM6 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
StrcQ8VIM6 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
StrcQ8VIM6 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
StrcQ8VIM6 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC15.7■□□□□ 0.1
StrcQ8VIM6 Gm44999-201ENSMUST00000207456 1493 ntBASIC15.7■□□□□ 0.1
StrcQ8VIM6 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
StrcQ8VIM6 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
StrcQ8VIM6 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
StrcQ8VIM6 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
StrcQ8VIM6 Gm10961-201ENSMUST00000106703 144 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
StrcQ8VIM6 Cav2-202ENSMUST00000115459 974 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
StrcQ8VIM6 Gm17168-201ENSMUST00000169146 345 ntTSL 5 BASIC15.7■□□□□ 0.1
StrcQ8VIM6 Creb1-209ENSMUST00000190348 1260 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
StrcQ8VIM6 D8Ertd738e-201ENSMUST00000019506 616 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
StrcQ8VIM6 Hax1-205ENSMUST00000197767 1092 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
StrcQ8VIM6 Gm45504-201ENSMUST00000211407 2107 ntBASIC15.7■□□□□ 0.1
StrcQ8VIM6 AC134869.3-201ENSMUST00000225581 343 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
StrcQ8VIM6 Plp2-201ENSMUST00000033486 1157 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
StrcQ8VIM6 Lcn6-201ENSMUST00000059693 1254 ntTSL 5 BASIC15.7■□□□□ 0.1
StrcQ8VIM6 Apc-201ENSMUST00000066133 1185 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
StrcQ8VIM6 Gm43697-201ENSMUST00000199637 2581 ntBASIC15.7■□□□□ 0.1
StrcQ8VIM6 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
StrcQ8VIM6 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
StrcQ8VIM6 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
StrcQ8VIM6 Spatc1l-201ENSMUST00000009259 1332 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
StrcQ8VIM6 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
StrcQ8VIM6 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
StrcQ8VIM6 Tnk2os-201ENSMUST00000141256 1392 ntTSL 2 BASIC15.7■□□□□ 0.1
StrcQ8VIM6 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
StrcQ8VIM6 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC15.69■□□□□ 0.1
StrcQ8VIM6 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
StrcQ8VIM6 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
StrcQ8VIM6 Ucp3-202ENSMUST00000107059 1260 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
StrcQ8VIM6 Ccl27a-203ENSMUST00000108033 428 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
StrcQ8VIM6 Fam129a-203ENSMUST00000111875 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
StrcQ8VIM6 Gm12015-201ENSMUST00000117065 843 ntBASIC15.69■□□□□ 0.1
StrcQ8VIM6 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC15.69■□□□□ 0.1
StrcQ8VIM6 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC15.69■□□□□ 0.1
StrcQ8VIM6 H2-Bl-202ENSMUST00000183560 316 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
StrcQ8VIM6 Gm19187-201ENSMUST00000206781 892 ntBASIC15.69■□□□□ 0.1
StrcQ8VIM6 Mob2-203ENSMUST00000209732 977 ntAPPRIS ALT2 TSL 3 BASIC15.69■□□□□ 0.1
StrcQ8VIM6 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC15.69■□□□□ 0.1
StrcQ8VIM6 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
StrcQ8VIM6 Gm21411-201ENSMUST00000049821 750 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
StrcQ8VIM6 Gm10312-201ENSMUST00000078515 489 ntBASIC15.69■□□□□ 0.1
StrcQ8VIM6 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
StrcQ8VIM6 Spert-204ENSMUST00000169658 1474 ntAPPRIS ALT2 TSL 3 BASIC15.69■□□□□ 0.1
StrcQ8VIM6 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
StrcQ8VIM6 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
StrcQ8VIM6 Gm10605-202ENSMUST00000183019 3198 ntBASIC15.69■□□□□ 0.1
StrcQ8VIM6 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
StrcQ8VIM6 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC15.69■□□□□ 0.1
StrcQ8VIM6 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
StrcQ8VIM6 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
StrcQ8VIM6 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC15.68■□□□□ 0.1
StrcQ8VIM6 Gm12134-201ENSMUST00000122109 520 ntBASIC15.68■□□□□ 0.1
StrcQ8VIM6 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
StrcQ8VIM6 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
StrcQ8VIM6 Gm5070-201ENSMUST00000177599 862 ntBASIC15.68■□□□□ 0.1
StrcQ8VIM6 Gm44968-201ENSMUST00000207652 1171 ntTSL 5 BASIC15.68■□□□□ 0.1
StrcQ8VIM6 AC101677.2-201ENSMUST00000218733 741 ntTSL 3 BASIC15.68■□□□□ 0.1
StrcQ8VIM6 Gm45925-201ENSMUST00000218882 744 ntBASIC15.68■□□□□ 0.1
StrcQ8VIM6 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC15.68■□□□□ 0.1
StrcQ8VIM6 Abhd14a-201ENSMUST00000048685 1256 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
StrcQ8VIM6 Olfr1250-201ENSMUST00000099768 1139 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
StrcQ8VIM6 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC15.68■□□□□ 0.1
StrcQ8VIM6 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
StrcQ8VIM6 Gm2673-201ENSMUST00000120958 1608 ntBASIC15.68■□□□□ 0.1
StrcQ8VIM6 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms