Protein–RNA interactions for Protein: Q8VIG6

Traip, E3 ubiquitin-protein ligase TRAIP, mousemouse

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TraipQ8VIG6 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TraipQ8VIG6 Gm10605-202ENSMUST00000183019 3198 ntBASIC14.43□□□□□ -0.1
TraipQ8VIG6 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TraipQ8VIG6 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
TraipQ8VIG6 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
TraipQ8VIG6 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
TraipQ8VIG6 Pcgf5-211ENSMUST00000225920 6443 ntBASIC14.43□□□□□ -0.1
TraipQ8VIG6 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TraipQ8VIG6 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TraipQ8VIG6 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TraipQ8VIG6 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TraipQ8VIG6 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TraipQ8VIG6 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC14.42□□□□□ -0.1
TraipQ8VIG6 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TraipQ8VIG6 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
TraipQ8VIG6 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TraipQ8VIG6 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
TraipQ8VIG6 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
TraipQ8VIG6 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TraipQ8VIG6 AC148324.1-201ENSMUST00000219034 4240 ntBASIC14.42□□□□□ -0.1
TraipQ8VIG6 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
TraipQ8VIG6 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
TraipQ8VIG6 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TraipQ8VIG6 Gm19087-201ENSMUST00000191430 946 ntBASIC14.42□□□□□ -0.1
TraipQ8VIG6 Gm37922-201ENSMUST00000195596 455 ntBASIC14.42□□□□□ -0.1
TraipQ8VIG6 Gm40466-201ENSMUST00000212174 422 ntBASIC14.42□□□□□ -0.1
TraipQ8VIG6 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC14.42□□□□□ -0.1
TraipQ8VIG6 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
TraipQ8VIG6 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TraipQ8VIG6 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC14.42□□□□□ -0.1
TraipQ8VIG6 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TraipQ8VIG6 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TraipQ8VIG6 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
TraipQ8VIG6 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TraipQ8VIG6 Gm10040-201ENSMUST00000080726 1662 ntBASIC14.42□□□□□ -0.1
TraipQ8VIG6 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TraipQ8VIG6 Gm42872-201ENSMUST00000200026 1967 ntBASIC14.42□□□□□ -0.1
TraipQ8VIG6 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TraipQ8VIG6 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC14.42□□□□□ -0.1
TraipQ8VIG6 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TraipQ8VIG6 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TraipQ8VIG6 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TraipQ8VIG6 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TraipQ8VIG6 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
TraipQ8VIG6 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TraipQ8VIG6 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
TraipQ8VIG6 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
TraipQ8VIG6 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TraipQ8VIG6 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC14.41□□□□□ -0.1
TraipQ8VIG6 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC14.41□□□□□ -0.1
TraipQ8VIG6 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
TraipQ8VIG6 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
TraipQ8VIG6 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
TraipQ8VIG6 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
TraipQ8VIG6 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
TraipQ8VIG6 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TraipQ8VIG6 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
TraipQ8VIG6 Kcne2-201ENSMUST00000047383 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TraipQ8VIG6 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
TraipQ8VIG6 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
TraipQ8VIG6 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TraipQ8VIG6 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TraipQ8VIG6 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
TraipQ8VIG6 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
TraipQ8VIG6 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC14.41□□□□□ -0.1
TraipQ8VIG6 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC14.41□□□□□ -0.1
TraipQ8VIG6 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
TraipQ8VIG6 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
TraipQ8VIG6 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TraipQ8VIG6 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
TraipQ8VIG6 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
TraipQ8VIG6 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TraipQ8VIG6 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TraipQ8VIG6 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TraipQ8VIG6 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
TraipQ8VIG6 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TraipQ8VIG6 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
TraipQ8VIG6 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TraipQ8VIG6 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
TraipQ8VIG6 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TraipQ8VIG6 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
TraipQ8VIG6 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TraipQ8VIG6 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC14.4□□□□□ -0.1
TraipQ8VIG6 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
TraipQ8VIG6 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
TraipQ8VIG6 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
TraipQ8VIG6 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
TraipQ8VIG6 Gm37785-201ENSMUST00000195783 2408 ntBASIC14.4□□□□□ -0.1
TraipQ8VIG6 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
TraipQ8VIG6 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TraipQ8VIG6 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC14.4□□□□□ -0.1
TraipQ8VIG6 Gm13392-201ENSMUST00000117708 150 ntBASIC14.4□□□□□ -0.1
TraipQ8VIG6 Gm11618-201ENSMUST00000117946 267 ntBASIC14.4□□□□□ -0.1
TraipQ8VIG6 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC14.4□□□□□ -0.1
TraipQ8VIG6 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
TraipQ8VIG6 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC14.4□□□□□ -0.1
TraipQ8VIG6 Gm44064-201ENSMUST00000204964 1087 ntBASIC14.4□□□□□ -0.1
TraipQ8VIG6 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
TraipQ8VIG6 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TraipQ8VIG6 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms