Protein–RNA interactions for Protein: Q8VHR0

Pcdh18, Protocadherin 18, mousemouse

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh18Q8VHR0 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdh18Q8VHR0 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdh18Q8VHR0 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdh18Q8VHR0 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
Pcdh18Q8VHR0 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdh18Q8VHR0 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdh18Q8VHR0 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdh18Q8VHR0 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdh18Q8VHR0 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdh18Q8VHR0 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdh18Q8VHR0 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Pcdh18Q8VHR0 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdh18Q8VHR0 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdh18Q8VHR0 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdh18Q8VHR0 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Pcdh18Q8VHR0 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdh18Q8VHR0 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdh18Q8VHR0 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC13.1□□□□□ -0.31
Pcdh18Q8VHR0 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdh18Q8VHR0 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdh18Q8VHR0 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdh18Q8VHR0 Gm43332-201ENSMUST00000202511 1044 ntBASIC13.1□□□□□ -0.31
Pcdh18Q8VHR0 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC13.1□□□□□ -0.31
Pcdh18Q8VHR0 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdh18Q8VHR0 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdh18Q8VHR0 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdh18Q8VHR0 Gm10175-201ENSMUST00000086013 645 ntBASIC13.1□□□□□ -0.31
Pcdh18Q8VHR0 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC13.1□□□□□ -0.31
Pcdh18Q8VHR0 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdh18Q8VHR0 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdh18Q8VHR0 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC13.1□□□□□ -0.31
Pcdh18Q8VHR0 AC154747.3-201ENSMUST00000224471 3470 ntBASIC13.1□□□□□ -0.31
Pcdh18Q8VHR0 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Pcdh18Q8VHR0 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdh18Q8VHR0 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdh18Q8VHR0 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdh18Q8VHR0 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdh18Q8VHR0 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC13.1□□□□□ -0.31
Pcdh18Q8VHR0 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdh18Q8VHR0 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdh18Q8VHR0 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Pcdh18Q8VHR0 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC13.1□□□□□ -0.31
Pcdh18Q8VHR0 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Pcdh18Q8VHR0 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdh18Q8VHR0 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdh18Q8VHR0 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdh18Q8VHR0 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdh18Q8VHR0 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdh18Q8VHR0 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdh18Q8VHR0 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdh18Q8VHR0 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdh18Q8VHR0 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdh18Q8VHR0 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Pcdh18Q8VHR0 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdh18Q8VHR0 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdh18Q8VHR0 Gm44891-201ENSMUST00000208817 2223 ntBASIC13.09□□□□□ -0.31
Pcdh18Q8VHR0 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdh18Q8VHR0 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdh18Q8VHR0 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdh18Q8VHR0 Gm28386-201ENSMUST00000189147 1849 ntBASIC13.09□□□□□ -0.31
Pcdh18Q8VHR0 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdh18Q8VHR0 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdh18Q8VHR0 AC122840.1-201ENSMUST00000220915 3334 ntBASIC13.09□□□□□ -0.31
Pcdh18Q8VHR0 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdh18Q8VHR0 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdh18Q8VHR0 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC13.09□□□□□ -0.31
Pcdh18Q8VHR0 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdh18Q8VHR0 Gm2810-201ENSMUST00000118681 990 ntBASIC13.09□□□□□ -0.31
Pcdh18Q8VHR0 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdh18Q8VHR0 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC13.09□□□□□ -0.31
Pcdh18Q8VHR0 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC13.09□□□□□ -0.31
Pcdh18Q8VHR0 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdh18Q8VHR0 Rprl2-201ENSMUST00000157150 290 ntBASIC13.09□□□□□ -0.31
Pcdh18Q8VHR0 Gm8584-201ENSMUST00000171982 758 ntBASIC13.09□□□□□ -0.31
Pcdh18Q8VHR0 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC13.09□□□□□ -0.31
Pcdh18Q8VHR0 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC13.09□□□□□ -0.31
Pcdh18Q8VHR0 AC132104.2-201ENSMUST00000215011 266 ntBASIC13.09□□□□□ -0.31
Pcdh18Q8VHR0 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC13.09□□□□□ -0.31
Pcdh18Q8VHR0 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC13.09□□□□□ -0.31
Pcdh18Q8VHR0 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC13.09□□□□□ -0.31
Pcdh18Q8VHR0 Gm5628-201ENSMUST00000222318 1049 ntBASIC13.09□□□□□ -0.31
Pcdh18Q8VHR0 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdh18Q8VHR0 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdh18Q8VHR0 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdh18Q8VHR0 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdh18Q8VHR0 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdh18Q8VHR0 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdh18Q8VHR0 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdh18Q8VHR0 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdh18Q8VHR0 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Pcdh18Q8VHR0 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdh18Q8VHR0 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdh18Q8VHR0 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Pcdh18Q8VHR0 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdh18Q8VHR0 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdh18Q8VHR0 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Pcdh18Q8VHR0 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdh18Q8VHR0 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdh18Q8VHR0 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdh18Q8VHR0 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms