Protein–RNA interactions for Protein: Q8VC56

Rnf8, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf8Q8VC56 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Rnf8Q8VC56 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rnf8Q8VC56 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rnf8Q8VC56 Gm16476-201ENSMUST00000221544 139 ntBASIC13.11□□□□□ -0.31
Rnf8Q8VC56 Dupd1-202ENSMUST00000224735 548 ntBASIC13.11□□□□□ -0.31
Rnf8Q8VC56 AC156016.3-201ENSMUST00000228623 344 ntBASIC13.11□□□□□ -0.31
Rnf8Q8VC56 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rnf8Q8VC56 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rnf8Q8VC56 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rnf8Q8VC56 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Rnf8Q8VC56 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rnf8Q8VC56 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rnf8Q8VC56 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rnf8Q8VC56 Gm9109-201ENSMUST00000120254 1405 ntBASIC13.11□□□□□ -0.31
Rnf8Q8VC56 AC124751.1-201ENSMUST00000222716 1408 ntBASIC13.11□□□□□ -0.31
Rnf8Q8VC56 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rnf8Q8VC56 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rnf8Q8VC56 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Rnf8Q8VC56 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC13.11□□□□□ -0.31
Rnf8Q8VC56 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC13.11□□□□□ -0.31
Rnf8Q8VC56 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rnf8Q8VC56 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Rnf8Q8VC56 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Rnf8Q8VC56 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rnf8Q8VC56 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rnf8Q8VC56 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Rnf8Q8VC56 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rnf8Q8VC56 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rnf8Q8VC56 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC13.11□□□□□ -0.31
Rnf8Q8VC56 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rnf8Q8VC56 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC13.11□□□□□ -0.31
Rnf8Q8VC56 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rnf8Q8VC56 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rnf8Q8VC56 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Rnf8Q8VC56 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC13.1□□□□□ -0.31
Rnf8Q8VC56 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rnf8Q8VC56 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
Rnf8Q8VC56 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rnf8Q8VC56 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rnf8Q8VC56 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
Rnf8Q8VC56 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Rnf8Q8VC56 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rnf8Q8VC56 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rnf8Q8VC56 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Rnf8Q8VC56 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rnf8Q8VC56 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rnf8Q8VC56 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rnf8Q8VC56 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rnf8Q8VC56 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rnf8Q8VC56 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Rnf8Q8VC56 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Rnf8Q8VC56 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rnf8Q8VC56 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC13.1□□□□□ -0.31
Rnf8Q8VC56 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rnf8Q8VC56 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC13.1□□□□□ -0.31
Rnf8Q8VC56 Gm17837-201ENSMUST00000186435 985 ntBASIC13.1□□□□□ -0.31
Rnf8Q8VC56 Gm38294-201ENSMUST00000192831 381 ntBASIC13.1□□□□□ -0.31
Rnf8Q8VC56 Gm37277-201ENSMUST00000194052 1111 ntBASIC13.1□□□□□ -0.31
Rnf8Q8VC56 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Rnf8Q8VC56 Gm6888-201ENSMUST00000221983 706 ntBASIC13.1□□□□□ -0.31
Rnf8Q8VC56 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rnf8Q8VC56 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Rnf8Q8VC56 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Rnf8Q8VC56 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rnf8Q8VC56 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rnf8Q8VC56 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC13.1□□□□□ -0.31
Rnf8Q8VC56 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Rnf8Q8VC56 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rnf8Q8VC56 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rnf8Q8VC56 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rnf8Q8VC56 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rnf8Q8VC56 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Rnf8Q8VC56 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rnf8Q8VC56 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Rnf8Q8VC56 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC13.1□□□□□ -0.31
Rnf8Q8VC56 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rnf8Q8VC56 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rnf8Q8VC56 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Rnf8Q8VC56 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rnf8Q8VC56 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rnf8Q8VC56 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC13.09□□□□□ -0.31
Rnf8Q8VC56 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rnf8Q8VC56 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rnf8Q8VC56 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Rnf8Q8VC56 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Rnf8Q8VC56 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Rnf8Q8VC56 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Rnf8Q8VC56 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC13.09□□□□□ -0.31
Rnf8Q8VC56 Mir7684-201ENSMUST00000183858 60 ntBASIC13.09□□□□□ -0.31
Rnf8Q8VC56 Mir8102-201ENSMUST00000184148 139 ntBASIC13.09□□□□□ -0.31
Rnf8Q8VC56 Gm44344-201ENSMUST00000200287 129 ntBASIC13.09□□□□□ -0.31
Rnf8Q8VC56 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC13.09□□□□□ -0.31
Rnf8Q8VC56 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC13.09□□□□□ -0.31
Rnf8Q8VC56 AC154595.3-201ENSMUST00000224579 384 ntBASIC13.09□□□□□ -0.31
Rnf8Q8VC56 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC13.09□□□□□ -0.31
Rnf8Q8VC56 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Rnf8Q8VC56 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rnf8Q8VC56 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC13.09□□□□□ -0.31
Rnf8Q8VC56 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rnf8Q8VC56 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 60.1 ms