Protein–RNA interactions for Protein: Q8VC31

Ccdc9, Coiled-coil domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 543 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc9Q8VC31 Grm4-202ENSMUST00000118489 2976 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Ccdc9Q8VC31 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC16.29■□□□□ 0.2
Ccdc9Q8VC31 Cd40-201ENSMUST00000017799 2986 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ccdc9Q8VC31 Gm43347-201ENSMUST00000200226 580 ntBASIC16.29■□□□□ 0.2
Ccdc9Q8VC31 AC158538.2-201ENSMUST00000225455 906 ntBASIC16.29■□□□□ 0.2
Ccdc9Q8VC31 Amotl2-211ENSMUST00000153965 4222 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ccdc9Q8VC31 Rbp3-201ENSMUST00000035695 5295 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ccdc9Q8VC31 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ccdc9Q8VC31 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ccdc9Q8VC31 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ccdc9Q8VC31 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Ccdc9Q8VC31 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ccdc9Q8VC31 Gm37849-201ENSMUST00000194722 1881 ntBASIC16.29■□□□□ 0.2
Ccdc9Q8VC31 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ccdc9Q8VC31 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ccdc9Q8VC31 Olfr464-204ENSMUST00000216461 2112 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Ccdc9Q8VC31 Aldh1a7-201ENSMUST00000025656 2066 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ccdc9Q8VC31 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ccdc9Q8VC31 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ccdc9Q8VC31 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ccdc9Q8VC31 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ccdc9Q8VC31 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ccdc9Q8VC31 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Ccdc9Q8VC31 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
Ccdc9Q8VC31 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC16.28■□□□□ 0.2
Ccdc9Q8VC31 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC16.28■□□□□ 0.2
Ccdc9Q8VC31 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC16.28■□□□□ 0.2
Ccdc9Q8VC31 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC16.28■□□□□ 0.2
Ccdc9Q8VC31 AC131690.1-201ENSMUST00000218406 374 ntBASIC16.28■□□□□ 0.2
Ccdc9Q8VC31 Gm10819-201ENSMUST00000099988 561 ntBASIC16.28■□□□□ 0.2
Ccdc9Q8VC31 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ccdc9Q8VC31 Vps16-201ENSMUST00000028900 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ccdc9Q8VC31 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ccdc9Q8VC31 AC124577.2-201ENSMUST00000217413 2420 ntBASIC16.28■□□□□ 0.2
Ccdc9Q8VC31 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ccdc9Q8VC31 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ccdc9Q8VC31 Hexim1-201ENSMUST00000053063 3495 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Ccdc9Q8VC31 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ccdc9Q8VC31 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ccdc9Q8VC31 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC16.28■□□□□ 0.2
Ccdc9Q8VC31 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Ccdc9Q8VC31 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ccdc9Q8VC31 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
Ccdc9Q8VC31 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Ccdc9Q8VC31 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ccdc9Q8VC31 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ccdc9Q8VC31 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ccdc9Q8VC31 Specc1-213ENSMUST00000202179 6676 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ccdc9Q8VC31 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
Ccdc9Q8VC31 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ccdc9Q8VC31 Kalrn-201ENSMUST00000076810 8940 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
Ccdc9Q8VC31 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ccdc9Q8VC31 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ccdc9Q8VC31 Gm4535-201ENSMUST00000182274 558 ntBASIC16.27■□□□□ 0.2
Ccdc9Q8VC31 Gm17971-201ENSMUST00000190239 806 ntBASIC16.27■□□□□ 0.2
Ccdc9Q8VC31 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Ccdc9Q8VC31 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC16.27■□□□□ 0.2
Ccdc9Q8VC31 Umpk-ps-201ENSMUST00000211897 827 ntBASIC16.27■□□□□ 0.2
Ccdc9Q8VC31 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC16.27■□□□□ 0.2
Ccdc9Q8VC31 AC159301.1-201ENSMUST00000225130 1182 ntBASIC16.27■□□□□ 0.2
Ccdc9Q8VC31 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ccdc9Q8VC31 Gm10355-201ENSMUST00000097146 517 ntBASIC16.27■□□□□ 0.2
Ccdc9Q8VC31 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC16.27■□□□□ 0.2
Ccdc9Q8VC31 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Ccdc9Q8VC31 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC16.27■□□□□ 0.19
Ccdc9Q8VC31 Mfsd9-201ENSMUST00000039672 3160 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Ccdc9Q8VC31 Olfr177-202ENSMUST00000217377 2401 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
Ccdc9Q8VC31 Rspry1-201ENSMUST00000060389 3852 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Ccdc9Q8VC31 Gm45650-201ENSMUST00000211162 2169 ntTSL 5 BASIC16.27■□□□□ 0.19
Ccdc9Q8VC31 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
Ccdc9Q8VC31 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Ccdc9Q8VC31 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Ccdc9Q8VC31 4933412E12Rik-201ENSMUST00000217853 1698 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Ccdc9Q8VC31 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Ccdc9Q8VC31 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Ccdc9Q8VC31 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Ccdc9Q8VC31 Adra1a-206ENSMUST00000225182 2337 ntBASIC16.27■□□□□ 0.19
Ccdc9Q8VC31 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Ccdc9Q8VC31 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC16.27■□□□□ 0.19
Ccdc9Q8VC31 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Ccdc9Q8VC31 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Ccdc9Q8VC31 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Ccdc9Q8VC31 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ccdc9Q8VC31 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ccdc9Q8VC31 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ccdc9Q8VC31 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Ccdc9Q8VC31 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Ccdc9Q8VC31 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ccdc9Q8VC31 Gm37660-201ENSMUST00000192754 1732 ntBASIC16.26■□□□□ 0.19
Ccdc9Q8VC31 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ccdc9Q8VC31 Gm7153-201ENSMUST00000117092 455 ntBASIC16.26■□□□□ 0.19
Ccdc9Q8VC31 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC16.26■□□□□ 0.19
Ccdc9Q8VC31 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC16.26■□□□□ 0.19
Ccdc9Q8VC31 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ccdc9Q8VC31 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Ccdc9Q8VC31 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Ccdc9Q8VC31 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC16.26■□□□□ 0.19
Ccdc9Q8VC31 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ccdc9Q8VC31 Kcnj5-201ENSMUST00000034533 4685 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ccdc9Q8VC31 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms