Protein–RNA interactions for Protein: Q8K353

Cystm1, Cysteine-rich and transmembrane domain-containing protein 1, mousemouse

Predictions only

Length 104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cystm1Q8K353 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Cystm1Q8K353 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Cystm1Q8K353 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Cystm1Q8K353 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Cystm1Q8K353 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC8.53□□□□□ -1.04
Cystm1Q8K353 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC8.53□□□□□ -1.04
Cystm1Q8K353 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC8.53□□□□□ -1.04
Cystm1Q8K353 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC8.53□□□□□ -1.04
Cystm1Q8K353 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Cystm1Q8K353 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Cystm1Q8K353 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC8.53□□□□□ -1.04
Cystm1Q8K353 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC8.53□□□□□ -1.04
Cystm1Q8K353 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Cystm1Q8K353 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Cystm1Q8K353 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Cystm1Q8K353 Agpat3-205ENSMUST00000105390 3513 ntAPPRIS P1 TSL 5 BASIC8.53□□□□□ -1.04
Cystm1Q8K353 Fosb-203ENSMUST00000207716 3546 ntTSL 5 BASIC8.53□□□□□ -1.04
Cystm1Q8K353 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC8.53□□□□□ -1.04
Cystm1Q8K353 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC8.53□□□□□ -1.04
Cystm1Q8K353 Zfp772-201ENSMUST00000074455 2777 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Cystm1Q8K353 Gm43868-201ENSMUST00000205187 2114 ntBASIC8.53□□□□□ -1.04
Cystm1Q8K353 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Cystm1Q8K353 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC8.53□□□□□ -1.04
Cystm1Q8K353 Gm29361-201ENSMUST00000183323 2000 ntBASIC8.53□□□□□ -1.04
Cystm1Q8K353 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Cystm1Q8K353 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Cystm1Q8K353 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Cystm1Q8K353 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Cystm1Q8K353 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Cystm1Q8K353 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Cystm1Q8K353 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Cystm1Q8K353 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC8.53□□□□□ -1.04
Cystm1Q8K353 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC8.53□□□□□ -1.04
Cystm1Q8K353 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC8.53□□□□□ -1.04
Cystm1Q8K353 Gm44492-201ENSMUST00000197012 141 ntBASIC8.53□□□□□ -1.04
Cystm1Q8K353 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC8.53□□□□□ -1.04
Cystm1Q8K353 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC8.53□□□□□ -1.04
Cystm1Q8K353 Gm18246-201ENSMUST00000221023 728 ntBASIC8.53□□□□□ -1.04
Cystm1Q8K353 CT009510.1-201ENSMUST00000227972 270 ntBASIC8.53□□□□□ -1.04
Cystm1Q8K353 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC8.53□□□□□ -1.04
Cystm1Q8K353 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC8.53□□□□□ -1.04
Cystm1Q8K353 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC8.53□□□□□ -1.04
Cystm1Q8K353 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Cystm1Q8K353 Mfsd9-201ENSMUST00000039672 3160 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Cystm1Q8K353 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Cystm1Q8K353 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC8.53□□□□□ -1.04
Cystm1Q8K353 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC8.53□□□□□ -1.04
Cystm1Q8K353 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Cystm1Q8K353 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC8.53□□□□□ -1.04
Cystm1Q8K353 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Cystm1Q8K353 Pfkp-201ENSMUST00000021614 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC8.53□□□□□ -1.04
Cystm1Q8K353 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Cystm1Q8K353 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Cystm1Q8K353 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Cystm1Q8K353 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC8.53□□□□□ -1.04
Cystm1Q8K353 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Cystm1Q8K353 B930036N10Rik-202ENSMUST00000181170 3544 ntBASIC8.53□□□□□ -1.04
Cystm1Q8K353 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Cystm1Q8K353 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC8.53□□□□□ -1.04
Cystm1Q8K353 Gm7901-201ENSMUST00000120430 1597 ntBASIC8.52□□□□□ -1.04
Cystm1Q8K353 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.04
Cystm1Q8K353 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.04
Cystm1Q8K353 Pigc-201ENSMUST00000028021 2196 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.04
Cystm1Q8K353 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC8.52□□□□□ -1.04
Cystm1Q8K353 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC8.52□□□□□ -1.05
Cystm1Q8K353 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Cystm1Q8K353 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC8.52□□□□□ -1.05
Cystm1Q8K353 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Cystm1Q8K353 Gm10729-202ENSMUST00000193403 1375 ntBASIC8.52□□□□□ -1.05
Cystm1Q8K353 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Cystm1Q8K353 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Cystm1Q8K353 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Cystm1Q8K353 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Cystm1Q8K353 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Cystm1Q8K353 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC8.52□□□□□ -1.05
Cystm1Q8K353 Ffar1-201ENSMUST00000052700 4175 ntAPPRIS P1 BASIC8.52□□□□□ -1.05
Cystm1Q8K353 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC8.52□□□□□ -1.05
Cystm1Q8K353 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Cystm1Q8K353 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC8.52□□□□□ -1.05
Cystm1Q8K353 Gm18737-201ENSMUST00000173594 937 ntBASIC8.52□□□□□ -1.05
Cystm1Q8K353 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC8.52□□□□□ -1.05
Cystm1Q8K353 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
Cystm1Q8K353 Gm37171-201ENSMUST00000192636 1185 ntBASIC8.52□□□□□ -1.05
Cystm1Q8K353 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC8.52□□□□□ -1.05
Cystm1Q8K353 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC8.52□□□□□ -1.05
Cystm1Q8K353 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC8.52□□□□□ -1.05
Cystm1Q8K353 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
Cystm1Q8K353 Gm44872-201ENSMUST00000207864 420 ntBASIC8.52□□□□□ -1.05
Cystm1Q8K353 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC8.52□□□□□ -1.05
Cystm1Q8K353 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC8.52□□□□□ -1.05
Cystm1Q8K353 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Cystm1Q8K353 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC8.52□□□□□ -1.05
Cystm1Q8K353 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC8.52□□□□□ -1.05
Cystm1Q8K353 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC8.52□□□□□ -1.05
Cystm1Q8K353 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
Cystm1Q8K353 Tgfb2-206ENSMUST00000195201 3485 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
Cystm1Q8K353 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC8.52□□□□□ -1.05
Cystm1Q8K353 Nrn1-204ENSMUST00000224323 1779 ntBASIC8.52□□□□□ -1.05
Cystm1Q8K353 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Cystm1Q8K353 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC8.52□□□□□ -1.05
Retrieved 100 of 76,532 protein–RNA pairs in 43.8 ms