Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC14.96□□□□□ -0.01
Trim9Q8C7M3 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Trim9Q8C7M3 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC14.96□□□□□ -0.01
Trim9Q8C7M3 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC14.96□□□□□ -0.01
Trim9Q8C7M3 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trim9Q8C7M3 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC14.96□□□□□ -0.01
Trim9Q8C7M3 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC14.96□□□□□ -0.01
Trim9Q8C7M3 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC14.96□□□□□ -0.01
Trim9Q8C7M3 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Trim9Q8C7M3 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC14.96□□□□□ -0.01
Trim9Q8C7M3 Gm17870-201ENSMUST00000219489 1174 ntBASIC14.96□□□□□ -0.01
Trim9Q8C7M3 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trim9Q8C7M3 AC158982.1-201ENSMUST00000228377 901 ntBASIC14.96□□□□□ -0.01
Trim9Q8C7M3 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trim9Q8C7M3 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Trim9Q8C7M3 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Trim9Q8C7M3 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trim9Q8C7M3 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trim9Q8C7M3 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
Trim9Q8C7M3 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trim9Q8C7M3 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trim9Q8C7M3 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Trim9Q8C7M3 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Trim9Q8C7M3 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC14.96□□□□□ -0.01
Trim9Q8C7M3 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trim9Q8C7M3 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trim9Q8C7M3 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Trim9Q8C7M3 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC14.96□□□□□ -0.02
Trim9Q8C7M3 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Trim9Q8C7M3 Gm38577-201ENSMUST00000221531 4545 ntBASIC14.96□□□□□ -0.02
Trim9Q8C7M3 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Trim9Q8C7M3 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.02
Trim9Q8C7M3 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Trim9Q8C7M3 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Trim9Q8C7M3 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trim9Q8C7M3 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC14.95□□□□□ -0.02
Trim9Q8C7M3 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trim9Q8C7M3 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC14.95□□□□□ -0.02
Trim9Q8C7M3 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trim9Q8C7M3 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trim9Q8C7M3 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trim9Q8C7M3 Gm44065-201ENSMUST00000203184 3527 ntBASIC14.95□□□□□ -0.02
Trim9Q8C7M3 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trim9Q8C7M3 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
Trim9Q8C7M3 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trim9Q8C7M3 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Trim9Q8C7M3 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trim9Q8C7M3 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trim9Q8C7M3 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trim9Q8C7M3 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Trim9Q8C7M3 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC14.95□□□□□ -0.02
Trim9Q8C7M3 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trim9Q8C7M3 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trim9Q8C7M3 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Trim9Q8C7M3 Gm5354-201ENSMUST00000182417 973 ntBASIC14.95□□□□□ -0.02
Trim9Q8C7M3 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC14.95□□□□□ -0.02
Trim9Q8C7M3 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC14.95□□□□□ -0.02
Trim9Q8C7M3 Gm44855-201ENSMUST00000205725 362 ntBASIC14.95□□□□□ -0.02
Trim9Q8C7M3 AC125206.2-201ENSMUST00000217454 574 ntBASIC14.95□□□□□ -0.02
Trim9Q8C7M3 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trim9Q8C7M3 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trim9Q8C7M3 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trim9Q8C7M3 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trim9Q8C7M3 Gm21038-201ENSMUST00000222205 1383 ntBASIC14.95□□□□□ -0.02
Trim9Q8C7M3 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC14.95□□□□□ -0.02
Trim9Q8C7M3 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Trim9Q8C7M3 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trim9Q8C7M3 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC14.95□□□□□ -0.02
Trim9Q8C7M3 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC14.95□□□□□ -0.02
Trim9Q8C7M3 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
Trim9Q8C7M3 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Trim9Q8C7M3 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Trim9Q8C7M3 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Trim9Q8C7M3 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC14.94□□□□□ -0.02
Trim9Q8C7M3 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trim9Q8C7M3 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC14.94□□□□□ -0.02
Trim9Q8C7M3 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC14.94□□□□□ -0.02
Trim9Q8C7M3 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trim9Q8C7M3 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC14.94□□□□□ -0.02
Trim9Q8C7M3 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Trim9Q8C7M3 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trim9Q8C7M3 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Trim9Q8C7M3 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Trim9Q8C7M3 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Trim9Q8C7M3 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trim9Q8C7M3 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trim9Q8C7M3 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trim9Q8C7M3 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC14.94□□□□□ -0.02
Trim9Q8C7M3 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trim9Q8C7M3 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Trim9Q8C7M3 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
Trim9Q8C7M3 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC14.94□□□□□ -0.02
Trim9Q8C7M3 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Trim9Q8C7M3 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Trim9Q8C7M3 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trim9Q8C7M3 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
Trim9Q8C7M3 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC14.94□□□□□ -0.02
Trim9Q8C7M3 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC14.94□□□□□ -0.02
Trim9Q8C7M3 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trim9Q8C7M3 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms