Protein–RNA interactions for Protein: Q811S7

Ubp1, Upstream-binding protein 1, mousemouse

Predictions only

Length 540 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1Q811S7 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ubp1Q811S7 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Ubp1Q811S7 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ubp1Q811S7 AC161252.3-201ENSMUST00000225465 1549 ntBASIC13.4□□□□□ -0.26
Ubp1Q811S7 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ubp1Q811S7 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Ubp1Q811S7 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ubp1Q811S7 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC13.4□□□□□ -0.26
Ubp1Q811S7 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ubp1Q811S7 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
Ubp1Q811S7 Gtpbp10-211ENSMUST00000198799 648 ntBASIC13.4□□□□□ -0.26
Ubp1Q811S7 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC13.4□□□□□ -0.26
Ubp1Q811S7 Gm45609-204ENSMUST00000209837 1207 ntTSL 5 BASIC13.4□□□□□ -0.26
Ubp1Q811S7 Gm32390-201ENSMUST00000212713 1172 ntBASIC13.4□□□□□ -0.26
Ubp1Q811S7 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC13.4□□□□□ -0.26
Ubp1Q811S7 Gm18934-201ENSMUST00000216671 1044 ntBASIC13.4□□□□□ -0.26
Ubp1Q811S7 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ubp1Q811S7 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC13.4□□□□□ -0.26
Ubp1Q811S7 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ubp1Q811S7 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ubp1Q811S7 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ubp1Q811S7 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ubp1Q811S7 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ubp1Q811S7 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ubp1Q811S7 Dnmt3aos-201ENSMUST00000144896 1385 ntTSL 2 BASIC13.4□□□□□ -0.26
Ubp1Q811S7 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Ubp1Q811S7 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Ubp1Q811S7 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC13.4□□□□□ -0.26
Ubp1Q811S7 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Ubp1Q811S7 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ubp1Q811S7 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Ubp1Q811S7 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ubp1Q811S7 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ubp1Q811S7 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ubp1Q811S7 Gm42872-201ENSMUST00000200026 1967 ntBASIC13.4□□□□□ -0.27
Ubp1Q811S7 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
Ubp1Q811S7 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
Ubp1Q811S7 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
Ubp1Q811S7 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Ubp1Q811S7 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Ubp1Q811S7 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ubp1Q811S7 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Ubp1Q811S7 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ubp1Q811S7 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC13.39□□□□□ -0.27
Ubp1Q811S7 Gm37133-201ENSMUST00000192705 1922 ntBASIC13.39□□□□□ -0.27
Ubp1Q811S7 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ubp1Q811S7 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ubp1Q811S7 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ubp1Q811S7 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Ubp1Q811S7 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ubp1Q811S7 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Ubp1Q811S7 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Ubp1Q811S7 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ubp1Q811S7 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Ubp1Q811S7 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Ubp1Q811S7 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ubp1Q811S7 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ubp1Q811S7 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ubp1Q811S7 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Ubp1Q811S7 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC13.39□□□□□ -0.27
Ubp1Q811S7 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ubp1Q811S7 Gm14730-201ENSMUST00000122378 1045 ntBASIC13.39□□□□□ -0.27
Ubp1Q811S7 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC13.39□□□□□ -0.27
Ubp1Q811S7 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ubp1Q811S7 Gm28631-201ENSMUST00000190740 334 ntBASIC13.39□□□□□ -0.27
Ubp1Q811S7 Gm43094-201ENSMUST00000196549 921 ntBASIC13.39□□□□□ -0.27
Ubp1Q811S7 Gm7498-201ENSMUST00000203282 1084 ntBASIC13.39□□□□□ -0.27
Ubp1Q811S7 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC13.39□□□□□ -0.27
Ubp1Q811S7 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Ubp1Q811S7 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ubp1Q811S7 AC131997.1-201ENSMUST00000228611 1229 ntBASIC13.39□□□□□ -0.27
Ubp1Q811S7 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ubp1Q811S7 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Ubp1Q811S7 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ubp1Q811S7 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Ubp1Q811S7 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Ubp1Q811S7 AC154849.3-201ENSMUST00000223733 1660 ntBASIC13.39□□□□□ -0.27
Ubp1Q811S7 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC13.39□□□□□ -0.27
Ubp1Q811S7 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Ubp1Q811S7 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ubp1Q811S7 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Ubp1Q811S7 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Ubp1Q811S7 Gm20632-201ENSMUST00000176760 2427 ntBASIC13.39□□□□□ -0.27
Ubp1Q811S7 AC166491.1-201ENSMUST00000227053 2308 ntBASIC13.39□□□□□ -0.27
Ubp1Q811S7 Gm19863-201ENSMUST00000192480 2218 ntBASIC13.39□□□□□ -0.27
Ubp1Q811S7 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ubp1Q811S7 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ubp1Q811S7 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Ubp1Q811S7 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC13.39□□□□□ -0.27
Ubp1Q811S7 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Ubp1Q811S7 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Ubp1Q811S7 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC13.38□□□□□ -0.27
Ubp1Q811S7 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ubp1Q811S7 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ubp1Q811S7 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ubp1Q811S7 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ubp1Q811S7 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Ubp1Q811S7 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ubp1Q811S7 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ubp1Q811S7 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 62.5 ms