Protein–RNA interactions for Protein: Q80UU2

Rpp38, Ribonuclease P protein subunit p38, mousemouse

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpp38Q80UU2 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Rpp38Q80UU2 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Rpp38Q80UU2 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Rpp38Q80UU2 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Rpp38Q80UU2 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Rpp38Q80UU2 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Rpp38Q80UU2 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Rpp38Q80UU2 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Rpp38Q80UU2 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Rpp38Q80UU2 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC13.54□□□□□ -0.24
Rpp38Q80UU2 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC13.54□□□□□ -0.24
Rpp38Q80UU2 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC13.54□□□□□ -0.24
Rpp38Q80UU2 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC13.54□□□□□ -0.24
Rpp38Q80UU2 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Rpp38Q80UU2 Gm37917-201ENSMUST00000194711 392 ntBASIC13.54□□□□□ -0.24
Rpp38Q80UU2 Gm42550-201ENSMUST00000201553 960 ntBASIC13.54□□□□□ -0.24
Rpp38Q80UU2 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC13.54□□□□□ -0.24
Rpp38Q80UU2 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Rpp38Q80UU2 AC238811.3-201ENSMUST00000225422 709 ntBASIC13.54□□□□□ -0.24
Rpp38Q80UU2 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC13.54□□□□□ -0.24
Rpp38Q80UU2 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Rpp38Q80UU2 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Rpp38Q80UU2 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Rpp38Q80UU2 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Rpp38Q80UU2 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Rpp38Q80UU2 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC13.54□□□□□ -0.24
Rpp38Q80UU2 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Rpp38Q80UU2 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Rpp38Q80UU2 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC13.54□□□□□ -0.24
Rpp38Q80UU2 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC13.54□□□□□ -0.24
Rpp38Q80UU2 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC13.54□□□□□ -0.24
Rpp38Q80UU2 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rpp38Q80UU2 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rpp38Q80UU2 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rpp38Q80UU2 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Rpp38Q80UU2 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rpp38Q80UU2 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Rpp38Q80UU2 Gm43273-201ENSMUST00000199649 2594 ntBASIC13.53□□□□□ -0.24
Rpp38Q80UU2 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rpp38Q80UU2 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Rpp38Q80UU2 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Rpp38Q80UU2 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rpp38Q80UU2 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Rpp38Q80UU2 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Rpp38Q80UU2 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rpp38Q80UU2 Gm12416-201ENSMUST00000120911 1008 ntBASIC13.53□□□□□ -0.24
Rpp38Q80UU2 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rpp38Q80UU2 Gm16342-201ENSMUST00000124025 1025 ntBASIC13.53□□□□□ -0.24
Rpp38Q80UU2 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC13.53□□□□□ -0.24
Rpp38Q80UU2 Gm6473-201ENSMUST00000188572 1210 ntBASIC13.53□□□□□ -0.24
Rpp38Q80UU2 Gm38223-201ENSMUST00000194484 695 ntBASIC13.53□□□□□ -0.24
Rpp38Q80UU2 AL593843.1-201ENSMUST00000195891 145 ntBASIC13.53□□□□□ -0.24
Rpp38Q80UU2 Gm18307-201ENSMUST00000206864 949 ntBASIC13.53□□□□□ -0.24
Rpp38Q80UU2 Gm18041-201ENSMUST00000218210 618 ntBASIC13.53□□□□□ -0.24
Rpp38Q80UU2 Gm18624-201ENSMUST00000220966 658 ntBASIC13.53□□□□□ -0.24
Rpp38Q80UU2 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Rpp38Q80UU2 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rpp38Q80UU2 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rpp38Q80UU2 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rpp38Q80UU2 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rpp38Q80UU2 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rpp38Q80UU2 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rpp38Q80UU2 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rpp38Q80UU2 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rpp38Q80UU2 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rpp38Q80UU2 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Rpp38Q80UU2 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Rpp38Q80UU2 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC13.52□□□□□ -0.24
Rpp38Q80UU2 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Rpp38Q80UU2 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Rpp38Q80UU2 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Rpp38Q80UU2 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Rpp38Q80UU2 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC13.52□□□□□ -0.24
Rpp38Q80UU2 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Rpp38Q80UU2 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Rpp38Q80UU2 Gm13689-201ENSMUST00000119360 685 ntBASIC13.52□□□□□ -0.25
Rpp38Q80UU2 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC13.52□□□□□ -0.25
Rpp38Q80UU2 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Rpp38Q80UU2 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Rpp38Q80UU2 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Rpp38Q80UU2 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Rpp38Q80UU2 Mir6392-201ENSMUST00000184924 108 ntBASIC13.52□□□□□ -0.25
Rpp38Q80UU2 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC13.52□□□□□ -0.25
Rpp38Q80UU2 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Rpp38Q80UU2 AC135669.1-201ENSMUST00000213585 412 ntBASIC13.52□□□□□ -0.25
Rpp38Q80UU2 AC073947.2-201ENSMUST00000215888 1130 ntBASIC13.52□□□□□ -0.25
Rpp38Q80UU2 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Rpp38Q80UU2 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Rpp38Q80UU2 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Rpp38Q80UU2 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Rpp38Q80UU2 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Rpp38Q80UU2 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Rpp38Q80UU2 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Rpp38Q80UU2 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Rpp38Q80UU2 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Rpp38Q80UU2 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Rpp38Q80UU2 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Rpp38Q80UU2 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Rpp38Q80UU2 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Rpp38Q80UU2 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 52.7 ms