Protein–RNA interactions for Protein: Q6PFF0

Scaf4, SR-related CTD-associated factor 4, mousemouse

Known RBP Predictions only

Length 1,209 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf4Q6PFF0 AC121804.3-201ENSMUST00000223420 295 ntBASIC13.38□□□□□ -0.27
Scaf4Q6PFF0 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Scaf4Q6PFF0 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Scaf4Q6PFF0 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Scaf4Q6PFF0 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC13.38□□□□□ -0.27
Scaf4Q6PFF0 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Scaf4Q6PFF0 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Scaf4Q6PFF0 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Scaf4Q6PFF0 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Scaf4Q6PFF0 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Scaf4Q6PFF0 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Scaf4Q6PFF0 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Scaf4Q6PFF0 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Scaf4Q6PFF0 AC137842.1-201ENSMUST00000227896 2064 ntBASIC13.38□□□□□ -0.27
Scaf4Q6PFF0 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC13.38□□□□□ -0.27
Scaf4Q6PFF0 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Scaf4Q6PFF0 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Scaf4Q6PFF0 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Scaf4Q6PFF0 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Scaf4Q6PFF0 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
Scaf4Q6PFF0 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC13.37□□□□□ -0.27
Scaf4Q6PFF0 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Scaf4Q6PFF0 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Scaf4Q6PFF0 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Scaf4Q6PFF0 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC13.37□□□□□ -0.27
Scaf4Q6PFF0 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC13.37□□□□□ -0.27
Scaf4Q6PFF0 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Scaf4Q6PFF0 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Scaf4Q6PFF0 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Scaf4Q6PFF0 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC13.37□□□□□ -0.27
Scaf4Q6PFF0 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Scaf4Q6PFF0 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC13.37□□□□□ -0.27
Scaf4Q6PFF0 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Scaf4Q6PFF0 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC13.37□□□□□ -0.27
Scaf4Q6PFF0 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC13.37□□□□□ -0.27
Scaf4Q6PFF0 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Scaf4Q6PFF0 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Scaf4Q6PFF0 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Scaf4Q6PFF0 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC13.37□□□□□ -0.27
Scaf4Q6PFF0 Gm9824-201ENSMUST00000178707 561 ntBASIC13.37□□□□□ -0.27
Scaf4Q6PFF0 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
Scaf4Q6PFF0 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC13.37□□□□□ -0.27
Scaf4Q6PFF0 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC13.37□□□□□ -0.27
Scaf4Q6PFF0 Gm16476-201ENSMUST00000221544 139 ntBASIC13.37□□□□□ -0.27
Scaf4Q6PFF0 AC131710.1-201ENSMUST00000228336 990 ntBASIC13.37□□□□□ -0.27
Scaf4Q6PFF0 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Scaf4Q6PFF0 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Scaf4Q6PFF0 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Scaf4Q6PFF0 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Scaf4Q6PFF0 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Scaf4Q6PFF0 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Scaf4Q6PFF0 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Scaf4Q6PFF0 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Scaf4Q6PFF0 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Scaf4Q6PFF0 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Scaf4Q6PFF0 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Scaf4Q6PFF0 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Scaf4Q6PFF0 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC13.37□□□□□ -0.27
Scaf4Q6PFF0 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Scaf4Q6PFF0 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Scaf4Q6PFF0 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Scaf4Q6PFF0 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Scaf4Q6PFF0 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC13.37□□□□□ -0.27
Scaf4Q6PFF0 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Scaf4Q6PFF0 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Scaf4Q6PFF0 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Scaf4Q6PFF0 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Scaf4Q6PFF0 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Scaf4Q6PFF0 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Scaf4Q6PFF0 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Scaf4Q6PFF0 Gm13332-201ENSMUST00000120451 1398 ntBASIC13.36□□□□□ -0.27
Scaf4Q6PFF0 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
Scaf4Q6PFF0 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Scaf4Q6PFF0 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Scaf4Q6PFF0 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Scaf4Q6PFF0 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Scaf4Q6PFF0 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Scaf4Q6PFF0 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Scaf4Q6PFF0 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Scaf4Q6PFF0 Gm18889-201ENSMUST00000174284 929 ntBASIC13.36□□□□□ -0.27
Scaf4Q6PFF0 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Scaf4Q6PFF0 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Scaf4Q6PFF0 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Scaf4Q6PFF0 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC13.36□□□□□ -0.27
Scaf4Q6PFF0 Gm15459-201ENSMUST00000117405 1941 ntBASIC13.36□□□□□ -0.27
Scaf4Q6PFF0 Gm8355-201ENSMUST00000177767 1941 ntBASIC13.36□□□□□ -0.27
Scaf4Q6PFF0 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Scaf4Q6PFF0 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Scaf4Q6PFF0 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Scaf4Q6PFF0 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Scaf4Q6PFF0 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Scaf4Q6PFF0 AC117194.1-201ENSMUST00000224847 3002 ntBASIC13.36□□□□□ -0.27
Scaf4Q6PFF0 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Scaf4Q6PFF0 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Scaf4Q6PFF0 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Scaf4Q6PFF0 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Scaf4Q6PFF0 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Scaf4Q6PFF0 AC154747.3-201ENSMUST00000224471 3470 ntBASIC13.36□□□□□ -0.27
Scaf4Q6PFF0 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Scaf4Q6PFF0 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms