Protein–RNA interactions for Protein: Q6PD21

Shb, SH2 domain-containing adapter protein B, mousemouse

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShbQ6PD21 Gm37444-201ENSMUST00000193605 439 ntBASIC14.44□□□□□ -0.1
ShbQ6PD21 Gm7848-201ENSMUST00000210739 718 ntBASIC14.44□□□□□ -0.1
ShbQ6PD21 Gm10752-201ENSMUST00000218348 729 ntBASIC14.44□□□□□ -0.1
ShbQ6PD21 AC140293.1-201ENSMUST00000225626 1247 ntBASIC14.44□□□□□ -0.1
ShbQ6PD21 Spcs1-203ENSMUST00000226374 592 ntBASIC14.44□□□□□ -0.1
ShbQ6PD21 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
ShbQ6PD21 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
ShbQ6PD21 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
ShbQ6PD21 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
ShbQ6PD21 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
ShbQ6PD21 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC14.44□□□□□ -0.1
ShbQ6PD21 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
ShbQ6PD21 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
ShbQ6PD21 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
ShbQ6PD21 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
ShbQ6PD21 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
ShbQ6PD21 Gm9279-201ENSMUST00000223175 1606 ntBASIC14.44□□□□□ -0.1
ShbQ6PD21 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
ShbQ6PD21 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
ShbQ6PD21 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
ShbQ6PD21 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
ShbQ6PD21 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
ShbQ6PD21 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
ShbQ6PD21 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
ShbQ6PD21 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
ShbQ6PD21 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
ShbQ6PD21 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
ShbQ6PD21 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC14.43□□□□□ -0.1
ShbQ6PD21 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
ShbQ6PD21 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
ShbQ6PD21 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
ShbQ6PD21 Vamp5-202ENSMUST00000101285 623 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
ShbQ6PD21 Folr1-201ENSMUST00000106981 960 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
ShbQ6PD21 Folr1-202ENSMUST00000106982 1039 ntAPPRIS P1 TSL 3 BASIC14.43□□□□□ -0.1
ShbQ6PD21 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC14.43□□□□□ -0.1
ShbQ6PD21 Gm6890-201ENSMUST00000114117 776 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
ShbQ6PD21 Zar1l-201ENSMUST00000118769 895 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
ShbQ6PD21 Anp32a-205ENSMUST00000135395 924 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
ShbQ6PD21 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
ShbQ6PD21 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
ShbQ6PD21 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
ShbQ6PD21 Gm44651-201ENSMUST00000207343 372 ntBASIC14.43□□□□□ -0.1
ShbQ6PD21 Gm45433-201ENSMUST00000209386 247 ntBASIC14.43□□□□□ -0.1
ShbQ6PD21 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC14.43□□□□□ -0.1
ShbQ6PD21 Timm9-201ENSMUST00000021486 794 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
ShbQ6PD21 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
ShbQ6PD21 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
ShbQ6PD21 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
ShbQ6PD21 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
ShbQ6PD21 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
ShbQ6PD21 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
ShbQ6PD21 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
ShbQ6PD21 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
ShbQ6PD21 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC14.43□□□□□ -0.1
ShbQ6PD21 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
ShbQ6PD21 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
ShbQ6PD21 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC14.43□□□□□ -0.1
ShbQ6PD21 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
ShbQ6PD21 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
ShbQ6PD21 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
ShbQ6PD21 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
ShbQ6PD21 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
ShbQ6PD21 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
ShbQ6PD21 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
ShbQ6PD21 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
ShbQ6PD21 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
ShbQ6PD21 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
ShbQ6PD21 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
ShbQ6PD21 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
ShbQ6PD21 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
ShbQ6PD21 Gm10961-201ENSMUST00000106703 144 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
ShbQ6PD21 Gm9062-201ENSMUST00000117712 727 ntBASIC14.42□□□□□ -0.1
ShbQ6PD21 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC14.42□□□□□ -0.1
ShbQ6PD21 Dnajb6-202ENSMUST00000012734 1024 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
ShbQ6PD21 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
ShbQ6PD21 Gm24749-201ENSMUST00000157838 343 ntBASIC14.42□□□□□ -0.1
ShbQ6PD21 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC14.42□□□□□ -0.1
ShbQ6PD21 Gm28982-201ENSMUST00000186895 512 ntTSL 3 BASIC14.42□□□□□ -0.1
ShbQ6PD21 Gm43058-201ENSMUST00000197645 625 ntBASIC14.42□□□□□ -0.1
ShbQ6PD21 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC14.42□□□□□ -0.1
ShbQ6PD21 Gm44126-201ENSMUST00000204831 514 ntBASIC14.42□□□□□ -0.1
ShbQ6PD21 AC166095.1-201ENSMUST00000223731 1241 ntBASIC14.42□□□□□ -0.1
ShbQ6PD21 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
ShbQ6PD21 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
ShbQ6PD21 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
ShbQ6PD21 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
ShbQ6PD21 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
ShbQ6PD21 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
ShbQ6PD21 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
ShbQ6PD21 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
ShbQ6PD21 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
ShbQ6PD21 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
ShbQ6PD21 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC14.42□□□□□ -0.1
ShbQ6PD21 Gm43205-201ENSMUST00000198622 1968 ntBASIC14.42□□□□□ -0.1
ShbQ6PD21 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
ShbQ6PD21 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
ShbQ6PD21 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
ShbQ6PD21 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
ShbQ6PD21 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
ShbQ6PD21 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms