Protein–RNA interactions for Protein: Q6P9Z1

Smarcd3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd3Q6P9Z1 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Smarcd3Q6P9Z1 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Smarcd3Q6P9Z1 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Smarcd3Q6P9Z1 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
Smarcd3Q6P9Z1 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC12.46□□□□□ -0.41
Smarcd3Q6P9Z1 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Smarcd3Q6P9Z1 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Smarcd3Q6P9Z1 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Smarcd3Q6P9Z1 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Smarcd3Q6P9Z1 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Smarcd3Q6P9Z1 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Smarcd3Q6P9Z1 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC12.46□□□□□ -0.41
Smarcd3Q6P9Z1 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Smarcd3Q6P9Z1 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Smarcd3Q6P9Z1 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Smarcd3Q6P9Z1 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC12.46□□□□□ -0.41
Smarcd3Q6P9Z1 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Smarcd3Q6P9Z1 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Smarcd3Q6P9Z1 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Smarcd3Q6P9Z1 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC12.46□□□□□ -0.41
Smarcd3Q6P9Z1 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Smarcd3Q6P9Z1 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Smarcd3Q6P9Z1 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Smarcd3Q6P9Z1 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC12.46□□□□□ -0.41
Smarcd3Q6P9Z1 Gm14822-201ENSMUST00000122247 291 ntBASIC12.46□□□□□ -0.41
Smarcd3Q6P9Z1 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Smarcd3Q6P9Z1 Gm24158-201ENSMUST00000175263 71 ntBASIC12.46□□□□□ -0.41
Smarcd3Q6P9Z1 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC12.46□□□□□ -0.41
Smarcd3Q6P9Z1 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC12.46□□□□□ -0.41
Smarcd3Q6P9Z1 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Smarcd3Q6P9Z1 Gm43474-201ENSMUST00000196415 774 ntBASIC12.46□□□□□ -0.41
Smarcd3Q6P9Z1 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Smarcd3Q6P9Z1 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC12.46□□□□□ -0.41
Smarcd3Q6P9Z1 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Smarcd3Q6P9Z1 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Smarcd3Q6P9Z1 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Smarcd3Q6P9Z1 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Smarcd3Q6P9Z1 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Smarcd3Q6P9Z1 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Smarcd3Q6P9Z1 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Smarcd3Q6P9Z1 Gm9924-202ENSMUST00000192760 2311 ntBASIC12.46□□□□□ -0.41
Smarcd3Q6P9Z1 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Smarcd3Q6P9Z1 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Smarcd3Q6P9Z1 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.42
Smarcd3Q6P9Z1 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Smarcd3Q6P9Z1 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC12.46□□□□□ -0.42
Smarcd3Q6P9Z1 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.42
Smarcd3Q6P9Z1 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Smarcd3Q6P9Z1 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Smarcd3Q6P9Z1 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Smarcd3Q6P9Z1 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Smarcd3Q6P9Z1 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Smarcd3Q6P9Z1 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Smarcd3Q6P9Z1 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.42
Smarcd3Q6P9Z1 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Smarcd3Q6P9Z1 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Smarcd3Q6P9Z1 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Smarcd3Q6P9Z1 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Smarcd3Q6P9Z1 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Smarcd3Q6P9Z1 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Smarcd3Q6P9Z1 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Smarcd3Q6P9Z1 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Smarcd3Q6P9Z1 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Smarcd3Q6P9Z1 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Smarcd3Q6P9Z1 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Smarcd3Q6P9Z1 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Smarcd3Q6P9Z1 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Smarcd3Q6P9Z1 Gm5648-201ENSMUST00000122244 1587 ntBASIC12.45□□□□□ -0.42
Smarcd3Q6P9Z1 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Smarcd3Q6P9Z1 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC12.45□□□□□ -0.42
Smarcd3Q6P9Z1 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC12.45□□□□□ -0.42
Smarcd3Q6P9Z1 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC12.45□□□□□ -0.42
Smarcd3Q6P9Z1 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC12.45□□□□□ -0.42
Smarcd3Q6P9Z1 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC12.45□□□□□ -0.42
Smarcd3Q6P9Z1 Ighv1-51-201ENSMUST00000192903 354 ntBASIC12.45□□□□□ -0.42
Smarcd3Q6P9Z1 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC12.45□□□□□ -0.42
Smarcd3Q6P9Z1 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Smarcd3Q6P9Z1 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Smarcd3Q6P9Z1 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Smarcd3Q6P9Z1 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Smarcd3Q6P9Z1 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Smarcd3Q6P9Z1 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Smarcd3Q6P9Z1 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Smarcd3Q6P9Z1 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Smarcd3Q6P9Z1 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC12.45□□□□□ -0.42
Smarcd3Q6P9Z1 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Smarcd3Q6P9Z1 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC12.45□□□□□ -0.42
Smarcd3Q6P9Z1 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Smarcd3Q6P9Z1 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Smarcd3Q6P9Z1 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Smarcd3Q6P9Z1 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Smarcd3Q6P9Z1 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Smarcd3Q6P9Z1 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Smarcd3Q6P9Z1 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Smarcd3Q6P9Z1 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Smarcd3Q6P9Z1 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Smarcd3Q6P9Z1 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Smarcd3Q6P9Z1 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Smarcd3Q6P9Z1 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Smarcd3Q6P9Z1 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 36 ms