Protein–RNA interactions for Protein: Q62388

Atm, Serine-protein kinase ATM, mousemouse

Predictions only

Length 3,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AtmQ62388 Cthrc1-201ENSMUST00000067072 1166 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
AtmQ62388 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
AtmQ62388 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
AtmQ62388 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
AtmQ62388 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
AtmQ62388 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
AtmQ62388 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
AtmQ62388 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
AtmQ62388 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
AtmQ62388 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
AtmQ62388 Rad54b-203ENSMUST00000108306 652 ntTSL 3 BASIC12.53□□□□□ -0.4
AtmQ62388 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC12.53□□□□□ -0.4
AtmQ62388 Tprkb-203ENSMUST00000113751 692 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
AtmQ62388 Gm24749-201ENSMUST00000157838 343 ntBASIC12.53□□□□□ -0.4
AtmQ62388 Mocs2-205ENSMUST00000165022 962 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
AtmQ62388 F12-202ENSMUST00000170921 478 ntTSL 3 BASIC12.53□□□□□ -0.4
AtmQ62388 Gm35822-201ENSMUST00000204954 562 ntTSL 3 BASIC12.53□□□□□ -0.4
AtmQ62388 Gm32025-201ENSMUST00000217960 307 ntBASIC12.53□□□□□ -0.4
AtmQ62388 AC135469.1-201ENSMUST00000225984 772 ntBASIC12.53□□□□□ -0.4
AtmQ62388 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
AtmQ62388 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
AtmQ62388 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
AtmQ62388 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
AtmQ62388 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC12.53□□□□□ -0.4
AtmQ62388 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
AtmQ62388 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
AtmQ62388 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
AtmQ62388 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC12.53□□□□□ -0.4
AtmQ62388 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
AtmQ62388 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
AtmQ62388 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
AtmQ62388 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
AtmQ62388 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
AtmQ62388 Gm14199-201ENSMUST00000130021 495 ntTSL 2 BASIC12.53□□□□□ -0.4
AtmQ62388 Rln1-201ENSMUST00000044143 745 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
AtmQ62388 Ntng1-201ENSMUST00000051253 327 ntBASIC12.53□□□□□ -0.4
AtmQ62388 Lce1e-201ENSMUST00000090867 711 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
AtmQ62388 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
AtmQ62388 Gm44065-201ENSMUST00000203184 3527 ntBASIC12.53□□□□□ -0.4
AtmQ62388 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
AtmQ62388 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
AtmQ62388 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.4
AtmQ62388 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.4
AtmQ62388 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
AtmQ62388 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
AtmQ62388 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
AtmQ62388 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
AtmQ62388 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
AtmQ62388 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
AtmQ62388 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
AtmQ62388 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.4
AtmQ62388 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
AtmQ62388 1810063I02Rik-201ENSMUST00000130205 274 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
AtmQ62388 Gm10863-201ENSMUST00000130745 438 ntTSL 3 BASIC12.52□□□□□ -0.4
AtmQ62388 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC12.52□□□□□ -0.4
AtmQ62388 Hcfc1r1-203ENSMUST00000180140 693 ntAPPRIS P2 TSL 2 BASIC12.52□□□□□ -0.4
AtmQ62388 Gm26956-201ENSMUST00000182176 986 ntBASIC12.52□□□□□ -0.4
AtmQ62388 Lcn6-201ENSMUST00000059693 1254 ntTSL 5 BASIC12.52□□□□□ -0.4
AtmQ62388 Gm43205-201ENSMUST00000198622 1968 ntBASIC12.52□□□□□ -0.4
AtmQ62388 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
AtmQ62388 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
AtmQ62388 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
AtmQ62388 Fyn-206ENSMUST00000136659 1910 ntTSL 5 BASIC12.52□□□□□ -0.41
AtmQ62388 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
AtmQ62388 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
AtmQ62388 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
AtmQ62388 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
AtmQ62388 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
AtmQ62388 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC12.52□□□□□ -0.41
AtmQ62388 Gm29155-201ENSMUST00000185910 269 ntBASIC12.52□□□□□ -0.41
AtmQ62388 1700119H24Rik-201ENSMUST00000187558 588 ntTSL 5 BASIC12.52□□□□□ -0.41
AtmQ62388 Gm28693-202ENSMUST00000190758 331 ntBASIC12.52□□□□□ -0.41
AtmQ62388 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
AtmQ62388 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC12.52□□□□□ -0.41
AtmQ62388 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
AtmQ62388 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
AtmQ62388 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
AtmQ62388 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
AtmQ62388 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
AtmQ62388 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
AtmQ62388 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
AtmQ62388 AC169511.2-201ENSMUST00000226674 2063 ntBASIC12.51□□□□□ -0.41
AtmQ62388 Gm10714-201ENSMUST00000131346 874 ntTSL 2 BASIC12.51□□□□□ -0.41
AtmQ62388 Pmvk-203ENSMUST00000184515 1156 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
AtmQ62388 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
AtmQ62388 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
AtmQ62388 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
AtmQ62388 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
AtmQ62388 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
AtmQ62388 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
AtmQ62388 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
AtmQ62388 Gm45495-201ENSMUST00000200940 1700 ntBASIC12.51□□□□□ -0.41
AtmQ62388 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
AtmQ62388 Eif5a-206ENSMUST00000108609 849 ntAPPRIS P1 TSL 3 BASIC12.51□□□□□ -0.41
AtmQ62388 Gm12690-201ENSMUST00000132108 354 ntTSL 3 BASIC12.51□□□□□ -0.41
AtmQ62388 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC12.51□□□□□ -0.41
AtmQ62388 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
AtmQ62388 Gm33222-201ENSMUST00000193725 654 ntTSL 3 BASIC12.51□□□□□ -0.41
AtmQ62388 E230034D01Rik-201ENSMUST00000214440 1212 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
AtmQ62388 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 46.1 ms