Protein–RNA interactions for Protein: Q61321

Six4, Homeobox protein SIX4, mousemouse

Predictions only

Length 775 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six4Q61321 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Six4Q61321 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Six4Q61321 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Six4Q61321 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Six4Q61321 Gm16342-201ENSMUST00000124025 1025 ntBASIC13.68□□□□□ -0.22
Six4Q61321 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC13.68□□□□□ -0.22
Six4Q61321 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC13.68□□□□□ -0.22
Six4Q61321 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Six4Q61321 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC13.68□□□□□ -0.22
Six4Q61321 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Six4Q61321 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC13.68□□□□□ -0.22
Six4Q61321 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC13.68□□□□□ -0.22
Six4Q61321 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Six4Q61321 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC13.68□□□□□ -0.22
Six4Q61321 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC13.68□□□□□ -0.22
Six4Q61321 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Six4Q61321 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC13.68□□□□□ -0.22
Six4Q61321 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Six4Q61321 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Six4Q61321 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Six4Q61321 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Six4Q61321 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Six4Q61321 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Six4Q61321 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Six4Q61321 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Six4Q61321 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC13.68□□□□□ -0.22
Six4Q61321 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Six4Q61321 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Six4Q61321 Tmed9-203ENSMUST00000224741 1450 ntBASIC13.67□□□□□ -0.22
Six4Q61321 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Six4Q61321 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Six4Q61321 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Six4Q61321 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Six4Q61321 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC13.67□□□□□ -0.22
Six4Q61321 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Six4Q61321 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Six4Q61321 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Six4Q61321 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Six4Q61321 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Six4Q61321 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Six4Q61321 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Six4Q61321 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Six4Q61321 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Six4Q61321 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC13.67□□□□□ -0.22
Six4Q61321 Gm6745-201ENSMUST00000199216 526 ntBASIC13.67□□□□□ -0.22
Six4Q61321 Gm9908-201ENSMUST00000211534 448 ntBASIC13.67□□□□□ -0.22
Six4Q61321 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
Six4Q61321 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Six4Q61321 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Six4Q61321 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Six4Q61321 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Six4Q61321 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Six4Q61321 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Six4Q61321 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Six4Q61321 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Six4Q61321 Grk6-205ENSMUST00000224653 2976 ntBASIC13.67□□□□□ -0.22
Six4Q61321 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Six4Q61321 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Six4Q61321 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Six4Q61321 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Six4Q61321 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Six4Q61321 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Six4Q61321 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Six4Q61321 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Six4Q61321 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC13.66□□□□□ -0.22
Six4Q61321 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Six4Q61321 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Six4Q61321 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Six4Q61321 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Six4Q61321 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Six4Q61321 Gm12138-201ENSMUST00000122180 951 ntBASIC13.66□□□□□ -0.22
Six4Q61321 Gm8515-201ENSMUST00000194852 576 ntBASIC13.66□□□□□ -0.22
Six4Q61321 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Six4Q61321 AC154239.3-201ENSMUST00000226933 674 ntBASIC13.66□□□□□ -0.22
Six4Q61321 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Six4Q61321 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Six4Q61321 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC13.66□□□□□ -0.22
Six4Q61321 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Six4Q61321 Gm13730-201ENSMUST00000121036 1462 ntBASIC13.66□□□□□ -0.22
Six4Q61321 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Six4Q61321 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Six4Q61321 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Six4Q61321 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Six4Q61321 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Six4Q61321 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC13.65□□□□□ -0.22
Six4Q61321 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Six4Q61321 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Six4Q61321 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Six4Q61321 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC13.65□□□□□ -0.22
Six4Q61321 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC13.65□□□□□ -0.22
Six4Q61321 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Six4Q61321 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Six4Q61321 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Six4Q61321 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Six4Q61321 Gm4782-201ENSMUST00000168705 2046 ntBASIC13.65□□□□□ -0.22
Six4Q61321 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Six4Q61321 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Six4Q61321 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Six4Q61321 Gm2495-201ENSMUST00000191160 466 ntBASIC13.65□□□□□ -0.22
Six4Q61321 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 43.7 ms