Protein–RNA interactions for Protein: Q4VGL6

Rc3h1, Roquin-1, mousemouse

Known RBP Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h1Q4VGL6 Gm9299-201ENSMUST00000206392 1140 ntBASIC15.65■□□□□ 0.1
Rc3h1Q4VGL6 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC15.65■□□□□ 0.1
Rc3h1Q4VGL6 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Rc3h1Q4VGL6 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Rc3h1Q4VGL6 AC139350.1-201ENSMUST00000227064 1594 ntBASIC15.65■□□□□ 0.1
Rc3h1Q4VGL6 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Rc3h1Q4VGL6 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Rc3h1Q4VGL6 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Rc3h1Q4VGL6 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Rc3h1Q4VGL6 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC15.65■□□□□ 0.1
Rc3h1Q4VGL6 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Rc3h1Q4VGL6 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Rc3h1Q4VGL6 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Rc3h1Q4VGL6 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Rc3h1Q4VGL6 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.1
Rc3h1Q4VGL6 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC15.64■□□□□ 0.1
Rc3h1Q4VGL6 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Rc3h1Q4VGL6 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Rc3h1Q4VGL6 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Rc3h1Q4VGL6 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Rc3h1Q4VGL6 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Rc3h1Q4VGL6 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Rc3h1Q4VGL6 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Rc3h1Q4VGL6 Gm37691-201ENSMUST00000192147 2573 ntBASIC15.64■□□□□ 0.09
Rc3h1Q4VGL6 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Rc3h1Q4VGL6 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC15.64■□□□□ 0.09
Rc3h1Q4VGL6 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Rc3h1Q4VGL6 Gm16177-201ENSMUST00000120728 718 ntBASIC15.64■□□□□ 0.09
Rc3h1Q4VGL6 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Rc3h1Q4VGL6 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC15.64■□□□□ 0.09
Rc3h1Q4VGL6 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC15.64■□□□□ 0.09
Rc3h1Q4VGL6 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC15.64■□□□□ 0.09
Rc3h1Q4VGL6 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
Rc3h1Q4VGL6 AC153962.4-201ENSMUST00000217878 242 ntBASIC15.64■□□□□ 0.09
Rc3h1Q4VGL6 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Rc3h1Q4VGL6 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Rc3h1Q4VGL6 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Rc3h1Q4VGL6 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Rc3h1Q4VGL6 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Rc3h1Q4VGL6 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Rc3h1Q4VGL6 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Rc3h1Q4VGL6 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Rc3h1Q4VGL6 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Rc3h1Q4VGL6 Gm5639-201ENSMUST00000122305 2403 ntBASIC15.64■□□□□ 0.09
Rc3h1Q4VGL6 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Rc3h1Q4VGL6 Gm37019-201ENSMUST00000192133 2134 ntBASIC15.64■□□□□ 0.09
Rc3h1Q4VGL6 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Rc3h1Q4VGL6 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Rc3h1Q4VGL6 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
Rc3h1Q4VGL6 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Rc3h1Q4VGL6 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Rc3h1Q4VGL6 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
Rc3h1Q4VGL6 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Rc3h1Q4VGL6 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Rc3h1Q4VGL6 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Rc3h1Q4VGL6 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Rc3h1Q4VGL6 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Rc3h1Q4VGL6 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Rc3h1Q4VGL6 Gm27331-201ENSMUST00000183705 60 ntBASIC15.63■□□□□ 0.09
Rc3h1Q4VGL6 Gm45784-201ENSMUST00000188360 142 ntBASIC15.63■□□□□ 0.09
Rc3h1Q4VGL6 Gm43371-201ENSMUST00000202838 1031 ntBASIC15.63■□□□□ 0.09
Rc3h1Q4VGL6 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Rc3h1Q4VGL6 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Rc3h1Q4VGL6 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
Rc3h1Q4VGL6 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Rc3h1Q4VGL6 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Rc3h1Q4VGL6 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Rc3h1Q4VGL6 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Rc3h1Q4VGL6 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC15.63■□□□□ 0.09
Rc3h1Q4VGL6 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Rc3h1Q4VGL6 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Rc3h1Q4VGL6 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Rc3h1Q4VGL6 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Rc3h1Q4VGL6 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Rc3h1Q4VGL6 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Rc3h1Q4VGL6 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Rc3h1Q4VGL6 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC15.62■□□□□ 0.09
Rc3h1Q4VGL6 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Rc3h1Q4VGL6 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Rc3h1Q4VGL6 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Rc3h1Q4VGL6 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Rc3h1Q4VGL6 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
Rc3h1Q4VGL6 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Rc3h1Q4VGL6 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Rc3h1Q4VGL6 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
Rc3h1Q4VGL6 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
Rc3h1Q4VGL6 Gm12957-201ENSMUST00000117835 377 ntBASIC15.62■□□□□ 0.09
Rc3h1Q4VGL6 Gm12203-201ENSMUST00000118235 598 ntBASIC15.62■□□□□ 0.09
Rc3h1Q4VGL6 Gm12209-201ENSMUST00000120089 596 ntBASIC15.62■□□□□ 0.09
Rc3h1Q4VGL6 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Rc3h1Q4VGL6 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC15.62■□□□□ 0.09
Rc3h1Q4VGL6 Gm43630-201ENSMUST00000201550 776 ntBASIC15.62■□□□□ 0.09
Rc3h1Q4VGL6 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC15.62■□□□□ 0.09
Rc3h1Q4VGL6 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
Rc3h1Q4VGL6 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Rc3h1Q4VGL6 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
Rc3h1Q4VGL6 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Rc3h1Q4VGL6 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
Rc3h1Q4VGL6 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
Rc3h1Q4VGL6 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 40 ms