Protein–RNA interactions for Protein: Q3U435

Mmp25, Matrix metalloproteinase-25, mousemouse

Predictions only

Length 615 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp25Q3U435 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Mmp25Q3U435 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Mmp25Q3U435 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Mmp25Q3U435 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Mmp25Q3U435 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Mmp25Q3U435 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Mmp25Q3U435 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Mmp25Q3U435 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Mmp25Q3U435 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Mmp25Q3U435 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Mmp25Q3U435 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Mmp25Q3U435 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Mmp25Q3U435 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Mmp25Q3U435 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC12.75□□□□□ -0.37
Mmp25Q3U435 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Mmp25Q3U435 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Mmp25Q3U435 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Mmp25Q3U435 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Mmp25Q3U435 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Mmp25Q3U435 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Mmp25Q3U435 Gm37019-201ENSMUST00000192133 2134 ntBASIC12.75□□□□□ -0.37
Mmp25Q3U435 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Mmp25Q3U435 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Mmp25Q3U435 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Mmp25Q3U435 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Mmp25Q3U435 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC12.75□□□□□ -0.37
Mmp25Q3U435 Gm7653-201ENSMUST00000214567 508 ntBASIC12.75□□□□□ -0.37
Mmp25Q3U435 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC12.75□□□□□ -0.37
Mmp25Q3U435 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Mmp25Q3U435 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Mmp25Q3U435 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC12.75□□□□□ -0.37
Mmp25Q3U435 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Mmp25Q3U435 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Mmp25Q3U435 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Mmp25Q3U435 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Mmp25Q3U435 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Mmp25Q3U435 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Mmp25Q3U435 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Mmp25Q3U435 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Mmp25Q3U435 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC12.74□□□□□ -0.37
Mmp25Q3U435 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Mmp25Q3U435 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Mmp25Q3U435 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Mmp25Q3U435 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Mmp25Q3U435 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Mmp25Q3U435 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC12.74□□□□□ -0.37
Mmp25Q3U435 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Mmp25Q3U435 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Mmp25Q3U435 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Mmp25Q3U435 Gm12138-201ENSMUST00000122180 951 ntBASIC12.74□□□□□ -0.37
Mmp25Q3U435 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC12.74□□□□□ -0.37
Mmp25Q3U435 Gm2495-201ENSMUST00000191160 466 ntBASIC12.74□□□□□ -0.37
Mmp25Q3U435 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC12.74□□□□□ -0.37
Mmp25Q3U435 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Mmp25Q3U435 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Mmp25Q3U435 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Mmp25Q3U435 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Mmp25Q3U435 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Mmp25Q3U435 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Mmp25Q3U435 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Mmp25Q3U435 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Mmp25Q3U435 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC12.74□□□□□ -0.37
Mmp25Q3U435 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC12.74□□□□□ -0.37
Mmp25Q3U435 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Mmp25Q3U435 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Mmp25Q3U435 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Mmp25Q3U435 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Mmp25Q3U435 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Mmp25Q3U435 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Mmp25Q3U435 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Mmp25Q3U435 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC12.73□□□□□ -0.37
Mmp25Q3U435 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Mmp25Q3U435 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Mmp25Q3U435 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC12.73□□□□□ -0.37
Mmp25Q3U435 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC12.73□□□□□ -0.37
Mmp25Q3U435 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Mmp25Q3U435 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Mmp25Q3U435 Mir692-1-201ENSMUST00000102263 109 ntBASIC12.73□□□□□ -0.37
Mmp25Q3U435 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Mmp25Q3U435 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Mmp25Q3U435 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Mmp25Q3U435 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC12.73□□□□□ -0.37
Mmp25Q3U435 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Mmp25Q3U435 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC12.73□□□□□ -0.37
Mmp25Q3U435 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC12.73□□□□□ -0.37
Mmp25Q3U435 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC12.73□□□□□ -0.37
Mmp25Q3U435 Gm45059-201ENSMUST00000205558 1077 ntBASIC12.73□□□□□ -0.37
Mmp25Q3U435 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC12.73□□□□□ -0.37
Mmp25Q3U435 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Mmp25Q3U435 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Mmp25Q3U435 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Mmp25Q3U435 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Mmp25Q3U435 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Mmp25Q3U435 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Mmp25Q3U435 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Mmp25Q3U435 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Mmp25Q3U435 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Mmp25Q3U435 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC12.73□□□□□ -0.37
Mmp25Q3U435 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC12.73□□□□□ -0.37
Mmp25Q3U435 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms