Protein–RNA interactions for Protein: Q3KNJ2

Nhej1, Non-homologous end-joining factor 1, mousemouse

Predictions only

Length 295 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nhej1Q3KNJ2 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Nhej1Q3KNJ2 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC14.47□□□□□ -0.09
Nhej1Q3KNJ2 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC14.47□□□□□ -0.09
Nhej1Q3KNJ2 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Nhej1Q3KNJ2 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Nhej1Q3KNJ2 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Nhej1Q3KNJ2 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Nhej1Q3KNJ2 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC14.47□□□□□ -0.09
Nhej1Q3KNJ2 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Nhej1Q3KNJ2 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Nhej1Q3KNJ2 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Nhej1Q3KNJ2 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC14.47□□□□□ -0.09
Nhej1Q3KNJ2 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Nhej1Q3KNJ2 Gm43134-201ENSMUST00000199434 1886 ntBASIC14.47□□□□□ -0.09
Nhej1Q3KNJ2 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Nhej1Q3KNJ2 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Nhej1Q3KNJ2 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC14.47□□□□□ -0.09
Nhej1Q3KNJ2 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC14.47□□□□□ -0.09
Nhej1Q3KNJ2 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Nhej1Q3KNJ2 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Nhej1Q3KNJ2 Shd-206ENSMUST00000225145 998 ntBASIC14.47□□□□□ -0.09
Nhej1Q3KNJ2 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Nhej1Q3KNJ2 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Nhej1Q3KNJ2 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Nhej1Q3KNJ2 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC14.47□□□□□ -0.09
Nhej1Q3KNJ2 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Nhej1Q3KNJ2 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Nhej1Q3KNJ2 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Nhej1Q3KNJ2 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Nhej1Q3KNJ2 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Nhej1Q3KNJ2 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Nhej1Q3KNJ2 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Nhej1Q3KNJ2 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Nhej1Q3KNJ2 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Nhej1Q3KNJ2 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Nhej1Q3KNJ2 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Nhej1Q3KNJ2 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC14.47□□□□□ -0.09
Nhej1Q3KNJ2 AC168058.1-201ENSMUST00000219521 2282 ntBASIC14.46□□□□□ -0.09
Nhej1Q3KNJ2 Gm43423-201ENSMUST00000198390 2094 ntBASIC14.46□□□□□ -0.09
Nhej1Q3KNJ2 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Nhej1Q3KNJ2 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Nhej1Q3KNJ2 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Nhej1Q3KNJ2 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Nhej1Q3KNJ2 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Nhej1Q3KNJ2 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC14.46□□□□□ -0.09
Nhej1Q3KNJ2 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Nhej1Q3KNJ2 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Nhej1Q3KNJ2 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Nhej1Q3KNJ2 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC14.46□□□□□ -0.09
Nhej1Q3KNJ2 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Nhej1Q3KNJ2 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Nhej1Q3KNJ2 Gm5779-201ENSMUST00000218467 910 ntBASIC14.46□□□□□ -0.09
Nhej1Q3KNJ2 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC14.46□□□□□ -0.09
Nhej1Q3KNJ2 AC225888.1-201ENSMUST00000227184 728 ntBASIC14.46□□□□□ -0.09
Nhej1Q3KNJ2 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Nhej1Q3KNJ2 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Nhej1Q3KNJ2 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Nhej1Q3KNJ2 AC124751.1-201ENSMUST00000222716 1408 ntBASIC14.46□□□□□ -0.09
Nhej1Q3KNJ2 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Nhej1Q3KNJ2 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC14.46□□□□□ -0.09
Nhej1Q3KNJ2 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Nhej1Q3KNJ2 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Nhej1Q3KNJ2 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Nhej1Q3KNJ2 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Nhej1Q3KNJ2 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Nhej1Q3KNJ2 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Nhej1Q3KNJ2 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Nhej1Q3KNJ2 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Nhej1Q3KNJ2 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Nhej1Q3KNJ2 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Nhej1Q3KNJ2 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Nhej1Q3KNJ2 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Nhej1Q3KNJ2 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Nhej1Q3KNJ2 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Nhej1Q3KNJ2 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Nhej1Q3KNJ2 Gm6415-201ENSMUST00000118488 348 ntBASIC14.45□□□□□ -0.1
Nhej1Q3KNJ2 Gm15693-201ENSMUST00000120470 637 ntBASIC14.45□□□□□ -0.1
Nhej1Q3KNJ2 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC14.45□□□□□ -0.1
Nhej1Q3KNJ2 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Nhej1Q3KNJ2 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC14.45□□□□□ -0.1
Nhej1Q3KNJ2 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Nhej1Q3KNJ2 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Nhej1Q3KNJ2 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Nhej1Q3KNJ2 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Nhej1Q3KNJ2 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Nhej1Q3KNJ2 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC14.45□□□□□ -0.1
Nhej1Q3KNJ2 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Nhej1Q3KNJ2 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Nhej1Q3KNJ2 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Nhej1Q3KNJ2 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC14.45□□□□□ -0.1
Nhej1Q3KNJ2 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nhej1Q3KNJ2 Gm14452-201ENSMUST00000118680 1632 ntBASIC14.44□□□□□ -0.1
Nhej1Q3KNJ2 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nhej1Q3KNJ2 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Nhej1Q3KNJ2 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Nhej1Q3KNJ2 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nhej1Q3KNJ2 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC14.44□□□□□ -0.1
Nhej1Q3KNJ2 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Nhej1Q3KNJ2 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC14.44□□□□□ -0.1
Nhej1Q3KNJ2 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 57 ms