Protein–RNA interactions for Protein: Q06507

Atf4, Cyclic AMP-dependent transcription factor ATF-4, mousemouse

Predictions only

Length 349 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf4Q06507 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC13.09□□□□□ -0.31
Atf4Q06507 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Atf4Q06507 Adam3-210ENSMUST00000171611 1202 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Atf4Q06507 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Atf4Q06507 Gm45331-201ENSMUST00000209868 554 ntBASIC13.09□□□□□ -0.31
Atf4Q06507 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC13.09□□□□□ -0.31
Atf4Q06507 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Atf4Q06507 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC13.09□□□□□ -0.31
Atf4Q06507 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Atf4Q06507 AC154441.1-201ENSMUST00000223653 1006 ntBASIC13.09□□□□□ -0.31
Atf4Q06507 AC154252.1-201ENSMUST00000226041 473 ntBASIC13.09□□□□□ -0.31
Atf4Q06507 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Atf4Q06507 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC13.09□□□□□ -0.31
Atf4Q06507 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Atf4Q06507 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Atf4Q06507 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Atf4Q06507 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Atf4Q06507 Gm43677-201ENSMUST00000198098 2378 ntBASIC13.09□□□□□ -0.31
Atf4Q06507 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Atf4Q06507 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC13.09□□□□□ -0.31
Atf4Q06507 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Atf4Q06507 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Atf4Q06507 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Atf4Q06507 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Atf4Q06507 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.31
Atf4Q06507 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Atf4Q06507 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.31
Atf4Q06507 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
Atf4Q06507 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Atf4Q06507 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Atf4Q06507 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Atf4Q06507 Gm42632-201ENSMUST00000201707 2411 ntBASIC13.08□□□□□ -0.32
Atf4Q06507 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Atf4Q06507 AC153962.3-202ENSMUST00000217778 1412 ntTSL 5 BASIC13.08□□□□□ -0.32
Atf4Q06507 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Atf4Q06507 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC13.08□□□□□ -0.32
Atf4Q06507 Gm12585-201ENSMUST00000117307 290 ntBASIC13.08□□□□□ -0.32
Atf4Q06507 Gm15678-201ENSMUST00000117573 960 ntBASIC13.08□□□□□ -0.32
Atf4Q06507 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Atf4Q06507 Gm4219-201ENSMUST00000168140 2143 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Atf4Q06507 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC13.08□□□□□ -0.32
Atf4Q06507 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Atf4Q06507 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Atf4Q06507 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC13.08□□□□□ -0.32
Atf4Q06507 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC13.08□□□□□ -0.32
Atf4Q06507 Gm45841-201ENSMUST00000207700 164 ntBASIC13.08□□□□□ -0.32
Atf4Q06507 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Atf4Q06507 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Atf4Q06507 Vmn1r231-201ENSMUST00000061278 936 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Atf4Q06507 Olfr1466-201ENSMUST00000075868 933 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Atf4Q06507 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Atf4Q06507 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Atf4Q06507 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Atf4Q06507 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Atf4Q06507 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Atf4Q06507 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Atf4Q06507 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Atf4Q06507 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Atf4Q06507 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Atf4Q06507 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Atf4Q06507 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Atf4Q06507 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Atf4Q06507 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Atf4Q06507 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Atf4Q06507 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Atf4Q06507 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Atf4Q06507 Tmem30c-202ENSMUST00000119407 1396 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Atf4Q06507 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Atf4Q06507 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Atf4Q06507 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Atf4Q06507 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Atf4Q06507 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Atf4Q06507 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC13.07□□□□□ -0.32
Atf4Q06507 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Atf4Q06507 4933404K08Rik-201ENSMUST00000156977 1434 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Atf4Q06507 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Atf4Q06507 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Atf4Q06507 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Atf4Q06507 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Atf4Q06507 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Atf4Q06507 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Atf4Q06507 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Atf4Q06507 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Atf4Q06507 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Atf4Q06507 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Atf4Q06507 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Atf4Q06507 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC13.07□□□□□ -0.32
Atf4Q06507 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC13.07□□□□□ -0.32
Atf4Q06507 9330185C12Rik-201ENSMUST00000180837 1009 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Atf4Q06507 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Atf4Q06507 Gm43222-201ENSMUST00000199013 603 ntBASIC13.07□□□□□ -0.32
Atf4Q06507 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC13.07□□□□□ -0.32
Atf4Q06507 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Atf4Q06507 Fam24a-202ENSMUST00000207439 711 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Atf4Q06507 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Atf4Q06507 Gm9182-201ENSMUST00000217829 639 ntBASIC13.07□□□□□ -0.32
Atf4Q06507 AC121804.3-201ENSMUST00000223420 295 ntBASIC13.07□□□□□ -0.32
Atf4Q06507 AC155729.1-201ENSMUST00000227758 544 ntBASIC13.07□□□□□ -0.32
Atf4Q06507 2310061N02Rik-201ENSMUST00000050882 794 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Atf4Q06507 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 38.9 ms