Protein–RNA interactions for Protein: Q04886

Sox8, Transcription factor SOX-8, mousemouse

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox8Q04886 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sox8Q04886 Rn7sk-201ENSMUST00000083103 331 ntBASIC14.3□□□□□ -0.12
Sox8Q04886 Gm26315-201ENSMUST00000083890 321 ntBASIC14.3□□□□□ -0.12
Sox8Q04886 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Sox8Q04886 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sox8Q04886 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sox8Q04886 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sox8Q04886 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sox8Q04886 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sox8Q04886 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC14.3□□□□□ -0.12
Sox8Q04886 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sox8Q04886 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sox8Q04886 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Sox8Q04886 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sox8Q04886 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Sox8Q04886 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC14.3□□□□□ -0.12
Sox8Q04886 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC14.3□□□□□ -0.12
Sox8Q04886 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sox8Q04886 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Sox8Q04886 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Sox8Q04886 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sox8Q04886 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sox8Q04886 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sox8Q04886 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sox8Q04886 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sox8Q04886 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Sox8Q04886 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sox8Q04886 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sox8Q04886 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC14.29□□□□□ -0.12
Sox8Q04886 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sox8Q04886 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sox8Q04886 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Sox8Q04886 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC14.29□□□□□ -0.12
Sox8Q04886 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sox8Q04886 Gm12390-201ENSMUST00000117897 397 ntBASIC14.29□□□□□ -0.12
Sox8Q04886 Gm15824-201ENSMUST00000119516 955 ntBASIC14.29□□□□□ -0.12
Sox8Q04886 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC14.29□□□□□ -0.12
Sox8Q04886 Gm6152-201ENSMUST00000151704 340 ntBASIC14.29□□□□□ -0.12
Sox8Q04886 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC14.29□□□□□ -0.12
Sox8Q04886 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC14.29□□□□□ -0.12
Sox8Q04886 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sox8Q04886 Gm18473-201ENSMUST00000220543 868 ntBASIC14.29□□□□□ -0.12
Sox8Q04886 Gm8598-201ENSMUST00000221184 836 ntBASIC14.29□□□□□ -0.12
Sox8Q04886 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Sox8Q04886 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Sox8Q04886 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Sox8Q04886 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Sox8Q04886 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Sox8Q04886 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sox8Q04886 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sox8Q04886 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sox8Q04886 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
Sox8Q04886 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sox8Q04886 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sox8Q04886 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Sox8Q04886 Gm10040-201ENSMUST00000080726 1662 ntBASIC14.29□□□□□ -0.12
Sox8Q04886 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sox8Q04886 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sox8Q04886 Gm7899-201ENSMUST00000192935 1897 ntBASIC14.29□□□□□ -0.12
Sox8Q04886 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Sox8Q04886 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sox8Q04886 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sox8Q04886 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sox8Q04886 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sox8Q04886 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sox8Q04886 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sox8Q04886 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Sox8Q04886 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sox8Q04886 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Sox8Q04886 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sox8Q04886 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Sox8Q04886 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Sox8Q04886 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC14.28□□□□□ -0.12
Sox8Q04886 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Sox8Q04886 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Sox8Q04886 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Sox8Q04886 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Sox8Q04886 Gm5421-201ENSMUST00000181698 2354 ntBASIC14.28□□□□□ -0.12
Sox8Q04886 Gm38144-201ENSMUST00000192790 465 ntBASIC14.28□□□□□ -0.12
Sox8Q04886 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC14.28□□□□□ -0.12
Sox8Q04886 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC14.28□□□□□ -0.12
Sox8Q04886 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sox8Q04886 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sox8Q04886 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sox8Q04886 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sox8Q04886 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sox8Q04886 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sox8Q04886 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sox8Q04886 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sox8Q04886 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Sox8Q04886 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sox8Q04886 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Sox8Q04886 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sox8Q04886 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sox8Q04886 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Sox8Q04886 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sox8Q04886 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sox8Q04886 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC14.28□□□□□ -0.12
Sox8Q04886 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sox8Q04886 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms